| Full name: long intergenic non-protein coding RNA 955 | Alias Symbol: FLJ35424 | ||
| Type: non-coding RNA | Cytoband: 4p16.3 | ||
| Entrez ID: 285492 | HGNC ID: HGNC:26644 | Ensembl Gene: ENSG00000216560 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC00955:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00955 | 285492 | 1553912_at | -0.0343 | 0.8896 | |
| GSE26886 | LINC00955 | 285492 | 1553912_at | 0.0021 | 0.9827 | |
| GSE45670 | LINC00955 | 285492 | 1553912_at | 0.0964 | 0.1602 | |
| GSE53622 | LINC00955 | 285492 | 108374 | 0.0442 | 0.6125 | |
| GSE53624 | LINC00955 | 285492 | 108374 | -0.0894 | 0.3591 | |
| GSE63941 | LINC00955 | 285492 | 1553912_at | -0.1670 | 0.1864 | |
| GSE77861 | LINC00955 | 285492 | 1553912_at | -0.1066 | 0.2215 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC00955 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00955:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00955 | 285492 | 0 | 17 | 13 | |
| GSE20123 | LINC00955 | 285492 | 0 | 17 | 13 | |
| GSE43470 | LINC00955 | 285492 | 0 | 18 | 25 | |
| GSE46452 | LINC00955 | 285492 | 1 | 36 | 22 | |
| GSE47630 | LINC00955 | 285492 | 1 | 19 | 20 | |
| GSE54993 | LINC00955 | 285492 | 10 | 0 | 60 | |
| GSE54994 | LINC00955 | 285492 | 3 | 12 | 38 | |
| GSE60625 | LINC00955 | 285492 | 0 | 0 | 11 | |
| GSE74703 | LINC00955 | 285492 | 0 | 14 | 22 | |
| GSE74704 | LINC00955 | 285492 | 0 | 9 | 11 | |
| TCGA | LINC00955 | 285492 | 7 | 47 | 42 |
Total number of gains: 22; Total number of losses: 189; Total Number of normals: 277.
Somatic mutations of LINC00955:
Generating mutation plots.
Highly correlated genes for LINC00955:
Showing top 20/30 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00955 | KRTAP4-11 | 0.698401 | 3 | 0 | 3 |
| LINC00955 | UCMA | 0.633875 | 3 | 0 | 3 |
| LINC00955 | KRT73 | 0.610507 | 3 | 0 | 3 |
| LINC00955 | OR2C3 | 0.610257 | 3 | 0 | 3 |
| LINC00955 | DHRS7C | 0.607302 | 4 | 0 | 4 |
| LINC00955 | CELA3A | 0.598802 | 3 | 0 | 3 |
| LINC00955 | LINC00930 | 0.590779 | 3 | 0 | 3 |
| LINC00955 | FCER2 | 0.586467 | 3 | 0 | 3 |
| LINC00955 | TEX13A | 0.583996 | 3 | 0 | 3 |
| LINC00955 | ARX | 0.578373 | 3 | 0 | 3 |
| LINC00955 | PRR29 | 0.577914 | 3 | 0 | 3 |
| LINC00955 | ACTL6B | 0.573597 | 3 | 0 | 3 |
| LINC00955 | SLC6A19 | 0.562559 | 4 | 0 | 3 |
| LINC00955 | LINC00620 | 0.561593 | 4 | 0 | 3 |
| LINC00955 | PITX3 | 0.554454 | 3 | 0 | 3 |
| LINC00955 | ZNF568 | 0.553125 | 4 | 0 | 3 |
| LINC00955 | HRCT1 | 0.551564 | 3 | 0 | 3 |
| LINC00955 | GNG12 | 0.548827 | 3 | 0 | 3 |
| LINC00955 | FGF22 | 0.548616 | 4 | 0 | 3 |
| LINC00955 | PLXNA4 | 0.544951 | 3 | 0 | 3 |
For details and further investigation, click here
