| Full name: long intergenic non-protein coding RNA 1220 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 14q24.3 | ||
| Entrez ID: 731223 | HGNC ID: HGNC:49664 | Ensembl Gene: ENSG00000259687 | OMIM ID: |
Expression of LINC01220:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC01220 | 731223 | 1563373_at | -0.0346 | 0.8664 | |
| GSE26886 | LINC01220 | 731223 | 1563373_at | -0.0259 | 0.7906 | |
| GSE45670 | LINC01220 | 731223 | 1563373_at | 0.1790 | 0.0412 | |
| GSE53622 | LINC01220 | 731223 | 126433 | 0.3337 | 0.0000 | |
| GSE53624 | LINC01220 | 731223 | 5127 | 0.3517 | 0.0000 | |
| GSE63941 | LINC01220 | 731223 | 1563373_at | 0.1466 | 0.3704 | |
| GSE77861 | LINC01220 | 731223 | 1563373_at | -0.1185 | 0.1700 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC01220 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC01220:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC01220 | 731223 | 8 | 3 | 19 | |
| GSE20123 | LINC01220 | 731223 | 8 | 3 | 19 | |
| GSE43470 | LINC01220 | 731223 | 8 | 3 | 32 | |
| GSE46452 | LINC01220 | 731223 | 16 | 3 | 40 | |
| GSE47630 | LINC01220 | 731223 | 11 | 8 | 21 | |
| GSE54993 | LINC01220 | 731223 | 3 | 8 | 59 | |
| GSE54994 | LINC01220 | 731223 | 19 | 4 | 30 | |
| GSE60625 | LINC01220 | 731223 | 0 | 2 | 9 | |
| GSE74703 | LINC01220 | 731223 | 7 | 3 | 26 | |
| GSE74704 | LINC01220 | 731223 | 3 | 3 | 14 |
Total number of gains: 83; Total number of losses: 40; Total Number of normals: 269.
Somatic mutations of LINC01220:
Generating mutation plots.
Highly correlated genes for LINC01220:
Showing top 20/76 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC01220 | OR3A3 | 0.710658 | 3 | 0 | 3 |
| LINC01220 | ADRB3 | 0.663206 | 3 | 0 | 3 |
| LINC01220 | THRA | 0.653348 | 3 | 0 | 3 |
| LINC01220 | GPR88 | 0.648879 | 3 | 0 | 3 |
| LINC01220 | CIB3 | 0.647502 | 3 | 0 | 3 |
| LINC01220 | DSCAM-AS1 | 0.639742 | 3 | 0 | 3 |
| LINC01220 | SIGLEC11 | 0.634673 | 4 | 0 | 4 |
| LINC01220 | ADCY2 | 0.627188 | 3 | 0 | 3 |
| LINC01220 | NRTN | 0.623157 | 3 | 0 | 3 |
| LINC01220 | BTNL8 | 0.620574 | 3 | 0 | 3 |
| LINC01220 | WFDC3 | 0.61445 | 4 | 0 | 3 |
| LINC01220 | KRT74 | 0.612969 | 3 | 0 | 3 |
| LINC01220 | ZNF667 | 0.607936 | 3 | 0 | 3 |
| LINC01220 | CTPS2 | 0.605763 | 3 | 0 | 3 |
| LINC01220 | CABP1 | 0.605113 | 3 | 0 | 3 |
| LINC01220 | TGM7 | 0.600021 | 3 | 0 | 3 |
| LINC01220 | LINC01122 | 0.59911 | 4 | 0 | 4 |
| LINC01220 | CACNG2 | 0.598591 | 3 | 0 | 3 |
| LINC01220 | SZRD1 | 0.598225 | 3 | 0 | 3 |
| LINC01220 | LINC00161 | 0.597889 | 4 | 0 | 4 |
For details and further investigation, click here
