| Full name: SUZ RNA binding domain containing 1 | Alias Symbol: DKFZp566C0424 | ||
| Type: protein-coding gene | Cytoband: 1p36.13 | ||
| Entrez ID: 26099 | HGNC ID: HGNC:30232 | Ensembl Gene: ENSG00000055070 | OMIM ID: |
Expression of SZRD1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SZRD1 | 26099 | 212004_at | -0.0319 | 0.9264 | |
| GSE20347 | SZRD1 | 26099 | 212004_at | -0.1478 | 0.0808 | |
| GSE23400 | SZRD1 | 26099 | 212004_at | -0.1427 | 0.0001 | |
| GSE26886 | SZRD1 | 26099 | 212004_at | -0.2955 | 0.0349 | |
| GSE29001 | SZRD1 | 26099 | 212002_at | 0.0674 | 0.8633 | |
| GSE38129 | SZRD1 | 26099 | 212004_at | -0.1767 | 0.0833 | |
| GSE45670 | SZRD1 | 26099 | 212004_at | 0.0968 | 0.3535 | |
| GSE53622 | SZRD1 | 26099 | 141166 | 0.0397 | 0.4735 | |
| GSE53624 | SZRD1 | 26099 | 141166 | 0.2175 | 0.0000 | |
| GSE63941 | SZRD1 | 26099 | 212004_at | 0.3308 | 0.2435 | |
| GSE77861 | SZRD1 | 26099 | 212004_at | -0.2102 | 0.1134 | |
| SRP007169 | SZRD1 | 26099 | RNAseq | -0.6694 | 0.0957 | |
| SRP008496 | SZRD1 | 26099 | RNAseq | -0.4710 | 0.0233 | |
| SRP064894 | SZRD1 | 26099 | RNAseq | 0.1115 | 0.4220 | |
| SRP133303 | SZRD1 | 26099 | RNAseq | 0.2571 | 0.0226 | |
| SRP159526 | SZRD1 | 26099 | RNAseq | -0.0462 | 0.8119 | |
| SRP193095 | SZRD1 | 26099 | RNAseq | 0.1032 | 0.3214 | |
| SRP219564 | SZRD1 | 26099 | RNAseq | -0.1029 | 0.7214 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by SZRD1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of SZRD1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SZRD1 | 26099 | 1 | 5 | 24 | |
| GSE20123 | SZRD1 | 26099 | 1 | 4 | 25 | |
| GSE43470 | SZRD1 | 26099 | 1 | 8 | 34 | |
| GSE46452 | SZRD1 | 26099 | 5 | 1 | 53 | |
| GSE47630 | SZRD1 | 26099 | 8 | 3 | 29 | |
| GSE54993 | SZRD1 | 26099 | 3 | 1 | 66 | |
| GSE54994 | SZRD1 | 26099 | 11 | 4 | 38 | |
| GSE60625 | SZRD1 | 26099 | 0 | 0 | 11 | |
| GSE74703 | SZRD1 | 26099 | 1 | 5 | 30 | |
| GSE74704 | SZRD1 | 26099 | 1 | 0 | 19 | |
| TCGA | SZRD1 | 26099 | 11 | 23 | 62 |
Total number of gains: 43; Total number of losses: 54; Total Number of normals: 391.
Somatic mutations of SZRD1:
Generating mutation plots.
Highly correlated genes for SZRD1:
Showing top 20/66 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SZRD1 | CYP4V2 | 0.631533 | 3 | 0 | 3 |
| SZRD1 | CAPN10 | 0.624803 | 3 | 0 | 3 |
| SZRD1 | B9D2 | 0.613173 | 4 | 0 | 3 |
| SZRD1 | GAS8 | 0.609816 | 4 | 0 | 4 |
| SZRD1 | CYP2A6 | 0.603252 | 4 | 0 | 4 |
| SZRD1 | MUL1 | 0.599983 | 7 | 0 | 5 |
| SZRD1 | CCDC141 | 0.598466 | 3 | 0 | 3 |
| SZRD1 | LINC01220 | 0.598225 | 3 | 0 | 3 |
| SZRD1 | ZNF213 | 0.594904 | 4 | 0 | 3 |
| SZRD1 | PAX8 | 0.587935 | 6 | 0 | 5 |
| SZRD1 | FHIT | 0.584463 | 3 | 0 | 3 |
| SZRD1 | RCAN3 | 0.582933 | 3 | 0 | 3 |
| SZRD1 | HUNK | 0.580563 | 4 | 0 | 3 |
| SZRD1 | PITHD1 | 0.57933 | 4 | 0 | 3 |
| SZRD1 | GABRQ | 0.576731 | 3 | 0 | 3 |
| SZRD1 | RAB17 | 0.575947 | 3 | 0 | 3 |
| SZRD1 | RNLS | 0.574626 | 3 | 0 | 3 |
| SZRD1 | NECAP2 | 0.573429 | 5 | 0 | 4 |
| SZRD1 | RFNG | 0.568552 | 4 | 0 | 3 |
| SZRD1 | IFNA21 | 0.564514 | 3 | 0 | 3 |
For details and further investigation, click here
