SLC17A9

 

Full name: solute carrier family 17 member 9 Alias Symbol: FLJ23412|VNUT
Type: protein-coding gene Cytoband: 20q13.33
Entrez ID: 63910 HGNC ID: HGNC:16192 Ensembl Gene: ENSG00000101194 OMIM ID: 612107
Drug and gene relationship at DGIdb

 

Expression of SLC17A9:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SLC17A9 63910 219559_at 0.1465 0.7396
GSE20347 SLC17A9 63910 219559_at 0.2418 0.0318
GSE23400 SLC17A9 63910 219559_at 0.0019 0.9702
GSE26886 SLC17A9 63910 232922_s_at -0.3400 0.0300
GSE29001 SLC17A9 63910 219559_at 0.1290 0.5145
GSE38129 SLC17A9 63910 219559_at 0.1278 0.2938
GSE45670 SLC17A9 63910 219559_at 0.1799 0.0809
GSE53622 SLC17A9 63910 14155 1.1878 0.0000
GSE53624 SLC17A9 63910 14155 1.4757 0.0000
GSE63941 SLC17A9 63910 219559_at 0.0347 0.9473
GSE77861 SLC17A9 63910 232922_s_at -0.1447 0.2260
GSE97050 SLC17A9 63910 A_33_P3229156 1.1976 0.1339
SRP007169 SLC17A9 63910 RNAseq 4.4714 0.0004
SRP064894 SLC17A9 63910 RNAseq 1.5115 0.0000
SRP133303 SLC17A9 63910 RNAseq 1.1312 0.0001
SRP159526 SLC17A9 63910 RNAseq 0.8662 0.0609
SRP193095 SLC17A9 63910 RNAseq 0.8761 0.0850
SRP219564 SLC17A9 63910 RNAseq 1.2816 0.0000
TCGA SLC17A9 63910 RNAseq -0.4852 0.0156

Upregulated datasets: 6; Downregulated datasets: 0.  


 

Survival by SLC17A9 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SLC17A9:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SLC17A9 63910 14 2 14
GSE20123 SLC17A9 63910 14 2 14
GSE43470 SLC17A9 63910 11 1 31
GSE46452 SLC17A9 63910 35 0 24
GSE47630 SLC17A9 63910 25 1 14
GSE54993 SLC17A9 63910 0 16 54
GSE54994 SLC17A9 63910 29 0 24
GSE60625 SLC17A9 63910 0 0 11
GSE74703 SLC17A9 63910 10 0 26
GSE74704 SLC17A9 63910 11 0 9
TCGA SLC17A9 63910 44 4 48

Total number of gains: 193; Total number of losses: 26; Total Number of normals: 269.  


 

Somatic mutations of SLC17A9:

 

Generating mutation plots.

 

Highly correlated genes for SLC17A9:

 

Showing top 20/343 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SLC17A9PDIA50.802106303
SLC17A9ACP20.722754303
SLC17A9PRDM140.696716303
SLC17A9LINC012260.691169303
SLC17A9MSC0.690393505
SLC17A9MCEMP10.689559303
SLC17A9FCGR2A0.68136404
SLC17A9OR51M10.680537303
SLC17A9COL22A10.677613403
SLC17A9CYP3A40.676938303
SLC17A9SNAP470.675798303
SLC17A9MEGF110.675451303
SLC17A9CD300LG0.665042303
SLC17A9FUT50.661218303
SLC17A9PIK3AP10.648303403
SLC17A9SLC12A10.645914303
SLC17A9RBP50.64348404
SLC17A9OLFML2B0.640201404
SLC17A9FNDC10.639256404
SLC17A9MATN40.638327303

For details and further investigation, click here