| Full name: leucine rich repeat containing 47 | Alias Symbol: KIAA1185|RP1-286D6.3 | ||
| Type: protein-coding gene | Cytoband: 1p36.32 | ||
| Entrez ID: 57470 | HGNC ID: HGNC:29207 | Ensembl Gene: ENSG00000130764 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LRRC47:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LRRC47 | 57470 | 212904_at | 0.1014 | 0.8799 | |
| GSE20347 | LRRC47 | 57470 | 212904_at | 0.0730 | 0.6090 | |
| GSE23400 | LRRC47 | 57470 | 212904_at | 0.1858 | 0.0017 | |
| GSE26886 | LRRC47 | 57470 | 212904_at | 0.5782 | 0.0053 | |
| GSE29001 | LRRC47 | 57470 | 212904_at | 0.1149 | 0.7097 | |
| GSE38129 | LRRC47 | 57470 | 212904_at | 0.1389 | 0.2981 | |
| GSE45670 | LRRC47 | 57470 | 212904_at | 0.0296 | 0.8542 | |
| GSE53622 | LRRC47 | 57470 | 13838 | 0.0719 | 0.2603 | |
| GSE53624 | LRRC47 | 57470 | 13838 | 0.1900 | 0.0420 | |
| GSE63941 | LRRC47 | 57470 | 212904_at | -0.2607 | 0.4677 | |
| GSE77861 | LRRC47 | 57470 | 212904_at | 0.0194 | 0.9330 | |
| GSE97050 | LRRC47 | 57470 | A_23_P96777 | -0.1702 | 0.4317 | |
| SRP007169 | LRRC47 | 57470 | RNAseq | -0.5300 | 0.2523 | |
| SRP008496 | LRRC47 | 57470 | RNAseq | -0.7085 | 0.0078 | |
| SRP064894 | LRRC47 | 57470 | RNAseq | 0.3560 | 0.0216 | |
| SRP133303 | LRRC47 | 57470 | RNAseq | 0.1201 | 0.5215 | |
| SRP159526 | LRRC47 | 57470 | RNAseq | 0.1572 | 0.6004 | |
| SRP193095 | LRRC47 | 57470 | RNAseq | 0.1261 | 0.1620 | |
| SRP219564 | LRRC47 | 57470 | RNAseq | -0.0107 | 0.9731 | |
| TCGA | LRRC47 | 57470 | RNAseq | -0.0165 | 0.7222 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LRRC47 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of LRRC47:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LRRC47 | 57470 | 4 | 6 | 20 | |
| GSE20123 | LRRC47 | 57470 | 4 | 5 | 21 | |
| GSE43470 | LRRC47 | 57470 | 3 | 5 | 35 | |
| GSE46452 | LRRC47 | 57470 | 7 | 1 | 51 | |
| GSE47630 | LRRC47 | 57470 | 8 | 4 | 28 | |
| GSE54993 | LRRC47 | 57470 | 3 | 2 | 65 | |
| GSE54994 | LRRC47 | 57470 | 14 | 3 | 36 | |
| GSE60625 | LRRC47 | 57470 | 0 | 0 | 11 | |
| GSE74703 | LRRC47 | 57470 | 3 | 3 | 30 | |
| GSE74704 | LRRC47 | 57470 | 4 | 0 | 16 | |
| TCGA | LRRC47 | 57470 | 14 | 20 | 62 |
Total number of gains: 64; Total number of losses: 49; Total Number of normals: 375.
Somatic mutations of LRRC47:
Generating mutation plots.
Highly correlated genes for LRRC47:
Showing top 20/579 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LRRC47 | CHCHD6 | 0.851843 | 3 | 0 | 3 |
| LRRC47 | COG1 | 0.817395 | 3 | 0 | 3 |
| LRRC47 | ZSCAN12 | 0.802708 | 4 | 0 | 4 |
| LRRC47 | ZNF121 | 0.791345 | 3 | 0 | 3 |
| LRRC47 | ZNF623 | 0.78185 | 3 | 0 | 3 |
| LRRC47 | CCDC124 | 0.777633 | 3 | 0 | 3 |
| LRRC47 | AGGF1 | 0.776555 | 3 | 0 | 3 |
| LRRC47 | FARS2 | 0.771345 | 3 | 0 | 3 |
| LRRC47 | LUC7L2 | 0.770282 | 3 | 0 | 3 |
| LRRC47 | SLC25A40 | 0.768545 | 3 | 0 | 3 |
| LRRC47 | LRRC34 | 0.765393 | 3 | 0 | 3 |
| LRRC47 | ZNF791 | 0.761975 | 3 | 0 | 3 |
| LRRC47 | ANKRD50 | 0.75975 | 3 | 0 | 3 |
| LRRC47 | ZNF432 | 0.754751 | 3 | 0 | 3 |
| LRRC47 | C7orf50 | 0.752555 | 3 | 0 | 3 |
| LRRC47 | PIGM | 0.74484 | 3 | 0 | 3 |
| LRRC47 | ARID2 | 0.741354 | 4 | 0 | 3 |
| LRRC47 | ZNF655 | 0.741219 | 3 | 0 | 3 |
| LRRC47 | ATP9A | 0.740365 | 3 | 0 | 3 |
| LRRC47 | FGGY | 0.734518 | 3 | 0 | 3 |
For details and further investigation, click here
