C7orf50

 

Full name: chromosome 7 open reading frame 50 Alias Symbol: MGC11257|YCR016W
Type: protein-coding gene Cytoband: 7p22.3
Entrez ID: 84310 HGNC ID: HGNC:22421 Ensembl Gene: ENSG00000146540 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of C7orf50:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 C7orf50 84310 224478_s_at 0.1307 0.6971
GSE26886 C7orf50 84310 224478_s_at 0.7823 0.0005
GSE45670 C7orf50 84310 224478_s_at 0.1493 0.3954
GSE53622 C7orf50 84310 60048 0.0807 0.3583
GSE53624 C7orf50 84310 60048 0.3422 0.0000
GSE63941 C7orf50 84310 224478_s_at 0.9362 0.0634
GSE77861 C7orf50 84310 224478_s_at 0.2286 0.1362
GSE97050 C7orf50 84310 A_23_P134477 0.0414 0.9364
SRP007169 C7orf50 84310 RNAseq 0.2777 0.6676
SRP008496 C7orf50 84310 RNAseq 0.9117 0.0249
SRP064894 C7orf50 84310 RNAseq 0.9145 0.0220
SRP133303 C7orf50 84310 RNAseq 0.5393 0.0012
SRP159526 C7orf50 84310 RNAseq 0.4812 0.0645
SRP193095 C7orf50 84310 RNAseq 0.2410 0.0548
SRP219564 C7orf50 84310 RNAseq 0.0988 0.8392
TCGA C7orf50 84310 RNAseq 0.0999 0.1203

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by C7orf50 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of C7orf50:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 C7orf50 84310 14 0 16
GSE20123 C7orf50 84310 14 0 16
GSE43470 C7orf50 84310 6 2 35
GSE46452 C7orf50 84310 13 1 45
GSE47630 C7orf50 84310 12 1 27
GSE54993 C7orf50 84310 3 10 57
GSE54994 C7orf50 84310 20 2 31
GSE60625 C7orf50 84310 0 0 11
GSE74703 C7orf50 84310 6 1 29
GSE74704 C7orf50 84310 9 0 11
TCGA C7orf50 84310 56 6 34

Total number of gains: 153; Total number of losses: 23; Total Number of normals: 312.  

 

Somatic mutations of C7orf50:

 

Generating mutation plots.

 

Highly correlated genes for C7orf50:

 

Showing top 20/528 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
C7orf50HEXA0.786237303
C7orf50SSBP40.780173303
C7orf50UBIAD10.779673303
C7orf50UBB0.775698303
C7orf50PITX20.773028303
C7orf50E4F10.766243303
C7orf50PHKG20.765424303
C7orf50LRRC470.752555303
C7orf50FTO0.747043404
C7orf50CHCHD60.739527404
C7orf50NTPCR0.732778303
C7orf50DNPEP0.728687404
C7orf50AGBL50.726949303
C7orf50PMPCB0.724934303
C7orf50NFATC10.723085303
C7orf50KIAA15860.723073303
C7orf50FITM20.719798403
C7orf50CEP1200.719002303
C7orf50ABHD80.718357303
C7orf50YIF1A0.716394303

For details and further investigation, click here