| Full name: microRNA 5188 | Alias Symbol: hsa-mir-5188 | ||
| Type: non-coding RNA | Cytoband: 12q24.31 | ||
| Entrez ID: 100847004 | HGNC ID: HGNC:43502 | Ensembl Gene: ENSG00000265345 | OMIM ID: |
Expression of MIR5188:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | MIR5188 | 100847004 | 238213_at | -0.2313 | 0.2961 | |
| GSE26886 | MIR5188 | 100847004 | 238213_at | -1.0547 | 0.0087 | |
| GSE45670 | MIR5188 | 100847004 | 238213_at | -0.5330 | 0.0538 | |
| GSE63941 | MIR5188 | 100847004 | 238213_at | 0.1139 | 0.2427 | |
| GSE77861 | MIR5188 | 100847004 | 238213_at | -0.1393 | 0.2066 |
Upregulated datasets: 0; Downregulated datasets: 1.
Copy number change of MIR5188:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | MIR5188 | 100847004 | 5 | 5 | 20 | |
| GSE20123 | MIR5188 | 100847004 | 5 | 5 | 20 | |
| GSE43470 | MIR5188 | 100847004 | 2 | 0 | 41 | |
| GSE46452 | MIR5188 | 100847004 | 9 | 1 | 49 | |
| GSE47630 | MIR5188 | 100847004 | 9 | 3 | 28 | |
| GSE54993 | MIR5188 | 100847004 | 0 | 5 | 65 | |
| GSE54994 | MIR5188 | 100847004 | 4 | 8 | 41 | |
| GSE60625 | MIR5188 | 100847004 | 0 | 0 | 11 | |
| GSE74703 | MIR5188 | 100847004 | 2 | 0 | 34 | |
| GSE74704 | MIR5188 | 100847004 | 3 | 3 | 14 | |
| TCGA | MIR5188 | 100847004 | 21 | 12 | 63 |
Total number of gains: 60; Total number of losses: 42; Total Number of normals: 386.
Somatic mutations of MIR5188:
Generating mutation plots.
Highly correlated genes for MIR5188:
Showing top 20/312 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| MIR5188 | ATG4A | 0.708007 | 3 | 0 | 3 |
| MIR5188 | ZNF426 | 0.687749 | 4 | 0 | 3 |
| MIR5188 | CAST | 0.66192 | 4 | 0 | 4 |
| MIR5188 | MYOZ1 | 0.660039 | 4 | 0 | 4 |
| MIR5188 | SLC8A1-AS1 | 0.659799 | 4 | 0 | 4 |
| MIR5188 | ETFDH | 0.658841 | 4 | 0 | 4 |
| MIR5188 | GYS2 | 0.657302 | 4 | 0 | 4 |
| MIR5188 | RANBP9 | 0.654678 | 4 | 0 | 4 |
| MIR5188 | CDKN2AIP | 0.653451 | 4 | 0 | 4 |
| MIR5188 | KRTAP3-2 | 0.651844 | 4 | 0 | 3 |
| MIR5188 | SMAGP | 0.650178 | 3 | 0 | 3 |
| MIR5188 | UBE2G1 | 0.649096 | 4 | 0 | 4 |
| MIR5188 | C18orf25 | 0.647051 | 4 | 0 | 4 |
| MIR5188 | ZFAND2B | 0.646087 | 4 | 0 | 4 |
| MIR5188 | ZNF416 | 0.643416 | 4 | 0 | 3 |
| MIR5188 | EPS8L1 | 0.64329 | 4 | 0 | 4 |
| MIR5188 | RFK | 0.642746 | 3 | 0 | 3 |
| MIR5188 | SFTA2 | 0.640608 | 4 | 0 | 4 |
| MIR5188 | CD207 | 0.640561 | 3 | 0 | 3 |
| MIR5188 | RAB9A | 0.639916 | 3 | 0 | 3 |
For details and further investigation, click here
