| Full name: small cell adhesion glycoprotein | Alias Symbol: MGC149453|MGC149454|hSMAGP | ||
| Type: protein-coding gene | Cytoband: 12q13.13 | ||
| Entrez ID: 57228 | HGNC ID: HGNC:26918 | Ensembl Gene: ENSG00000170545 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of SMAGP:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SMAGP | 57228 | 209679_s_at | -1.5345 | 0.1511 | |
| GSE20347 | SMAGP | 57228 | 209679_s_at | -2.0914 | 0.0000 | |
| GSE23400 | SMAGP | 57228 | 209679_s_at | -1.5126 | 0.0000 | |
| GSE26886 | SMAGP | 57228 | 209679_s_at | -2.8189 | 0.0000 | |
| GSE29001 | SMAGP | 57228 | 209679_s_at | -2.0811 | 0.0000 | |
| GSE38129 | SMAGP | 57228 | 209679_s_at | -1.4300 | 0.0002 | |
| GSE45670 | SMAGP | 57228 | 209679_s_at | -1.1528 | 0.0020 | |
| GSE53622 | SMAGP | 57228 | 28328 | -1.7481 | 0.0000 | |
| GSE53624 | SMAGP | 57228 | 28328 | -2.0385 | 0.0000 | |
| GSE63941 | SMAGP | 57228 | 209679_s_at | 1.3100 | 0.0471 | |
| GSE77861 | SMAGP | 57228 | 209679_s_at | -1.6200 | 0.0044 | |
| GSE97050 | SMAGP | 57228 | A_23_P64837 | -0.1614 | 0.8443 | |
| SRP007169 | SMAGP | 57228 | RNAseq | -3.4881 | 0.0000 | |
| SRP008496 | SMAGP | 57228 | RNAseq | -3.2558 | 0.0000 | |
| SRP064894 | SMAGP | 57228 | RNAseq | -2.3034 | 0.0000 | |
| SRP133303 | SMAGP | 57228 | RNAseq | -1.9228 | 0.0000 | |
| SRP159526 | SMAGP | 57228 | RNAseq | -2.7824 | 0.0000 | |
| SRP193095 | SMAGP | 57228 | RNAseq | -2.1208 | 0.0000 | |
| SRP219564 | SMAGP | 57228 | RNAseq | -2.7169 | 0.0010 | |
| TCGA | SMAGP | 57228 | RNAseq | -0.0711 | 0.5713 |
Upregulated datasets: 1; Downregulated datasets: 16.
Survival by SMAGP expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SMAGP:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SMAGP | 57228 | 8 | 1 | 21 | |
| GSE20123 | SMAGP | 57228 | 8 | 1 | 21 | |
| GSE43470 | SMAGP | 57228 | 4 | 0 | 39 | |
| GSE46452 | SMAGP | 57228 | 8 | 1 | 50 | |
| GSE47630 | SMAGP | 57228 | 11 | 2 | 27 | |
| GSE54993 | SMAGP | 57228 | 0 | 5 | 65 | |
| GSE54994 | SMAGP | 57228 | 3 | 2 | 48 | |
| GSE60625 | SMAGP | 57228 | 0 | 0 | 11 | |
| GSE74703 | SMAGP | 57228 | 3 | 0 | 33 | |
| GSE74704 | SMAGP | 57228 | 5 | 1 | 14 | |
| TCGA | SMAGP | 57228 | 14 | 11 | 71 |
Total number of gains: 64; Total number of losses: 24; Total Number of normals: 400.
Somatic mutations of SMAGP:
Generating mutation plots.
Highly correlated genes for SMAGP:
Showing top 20/1682 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SMAGP | GDPD3 | 0.861226 | 11 | 0 | 11 |
| SMAGP | C5orf66-AS1 | 0.859467 | 6 | 0 | 6 |
| SMAGP | TPRG1 | 0.858736 | 6 | 0 | 6 |
| SMAGP | TP53I3 | 0.852807 | 11 | 0 | 11 |
| SMAGP | RMND5B | 0.85233 | 10 | 0 | 10 |
| SMAGP | CHP1 | 0.851887 | 10 | 0 | 10 |
| SMAGP | CXCR2 | 0.850734 | 10 | 0 | 10 |
| SMAGP | ACPP | 0.850358 | 12 | 0 | 12 |
| SMAGP | KLB | 0.849784 | 6 | 0 | 6 |
| SMAGP | SFTA2 | 0.849666 | 4 | 0 | 4 |
| SMAGP | SLC16A6 | 0.84519 | 10 | 0 | 10 |
| SMAGP | ENDOU | 0.840513 | 11 | 0 | 11 |
| SMAGP | GYS2 | 0.838434 | 10 | 0 | 10 |
| SMAGP | FUT3 | 0.835916 | 12 | 0 | 12 |
| SMAGP | CYSRT1 | 0.834896 | 6 | 0 | 6 |
| SMAGP | ESPL1 | 0.83165 | 12 | 0 | 12 |
| SMAGP | FAM3D | 0.830803 | 8 | 0 | 7 |
| SMAGP | EVPL | 0.828685 | 12 | 0 | 11 |
| SMAGP | BLNK | 0.826233 | 11 | 0 | 10 |
| SMAGP | UPK3B | 0.823482 | 3 | 0 | 3 |
For details and further investigation, click here
