NUDT6

 

Full name: nudix hydrolase 6 Alias Symbol: gfg-1|gfg|FGF2AS|FGF-AS
Type: protein-coding gene Cytoband: 4q28.1
Entrez ID: 11162 HGNC ID: HGNC:8053 Ensembl Gene: ENSG00000170917 OMIM ID: 606261
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of NUDT6:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 NUDT6 11162 230329_s_at 0.0006 0.9994
GSE20347 NUDT6 11162 220183_s_at -0.1263 0.2361
GSE23400 NUDT6 11162 220183_s_at -0.0755 0.0001
GSE26886 NUDT6 11162 230329_s_at 0.1920 0.4286
GSE29001 NUDT6 11162 220183_s_at -0.0336 0.8851
GSE38129 NUDT6 11162 220183_s_at -0.0960 0.6081
GSE45670 NUDT6 11162 230329_s_at -0.4794 0.0155
GSE63941 NUDT6 11162 230329_s_at 0.2229 0.7391
GSE77861 NUDT6 11162 230329_s_at -0.1284 0.3569
GSE97050 NUDT6 11162 A_23_P155857 -0.2168 0.4808
SRP064894 NUDT6 11162 RNAseq 0.1931 0.4690
SRP133303 NUDT6 11162 RNAseq -0.4647 0.0774
SRP159526 NUDT6 11162 RNAseq -0.2294 0.5191
SRP193095 NUDT6 11162 RNAseq -0.2031 0.2464
SRP219564 NUDT6 11162 RNAseq -0.0142 0.9749
TCGA NUDT6 11162 RNAseq -0.1540 0.2535

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by NUDT6 expression:

 

TCGA

 

Note: Click image to view full size file.  


Copy number change of NUDT6:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 NUDT6 11162 0 13 17
GSE20123 NUDT6 11162 0 13 17
GSE43470 NUDT6 11162 0 13 30
GSE46452 NUDT6 11162 1 36 22
GSE47630 NUDT6 11162 0 22 18
GSE54993 NUDT6 11162 9 0 61
GSE54994 NUDT6 11162 1 10 42
GSE60625 NUDT6 11162 0 1 10
GSE74703 NUDT6 11162 0 11 25
GSE74704 NUDT6 11162 0 7 13
TCGA NUDT6 11162 8 35 53

Total number of gains: 19; Total number of losses: 161; Total Number of normals: 308.  


 

Somatic mutations of NUDT6:

 

Generating mutation plots.

 

Highly correlated genes for NUDT6:

 

Showing top 20/100 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
NUDT6FGL20.669254404
NUDT6RASSF20.660677303
NUDT6ARHGAP60.658838404
NUDT6MAN1C10.656182303
NUDT6CPQ0.649264303
NUDT6MAGEH10.646648303
NUDT6FBXL70.643437303
NUDT6BEND50.639374303
NUDT6RPS27A0.637321303
NUDT6PDE1A0.63673303
NUDT6NLGN10.635929303
NUDT6TNS10.63366303
NUDT6ANK20.63205303
NUDT6CHRDL10.621829303
NUDT6SLC16A40.618675303
NUDT6ST6GALNAC30.616788303
NUDT6CTSF0.61593303
NUDT6STS0.611071404
NUDT6ARMCX10.610097303
NUDT6RCAN20.609579303

For details and further investigation, click here