SLC16A4

 

Full name: solute carrier family 16 member 4 Alias Symbol: MCT4|MCT5
Type: protein-coding gene Cytoband: 1p13.3
Entrez ID: 9122 HGNC ID: HGNC:10925 Ensembl Gene: ENSG00000168679 OMIM ID: 603878
Drug and gene relationship at DGIdb

 

Expression of SLC16A4:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SLC16A4 9122 205234_at -1.1146 0.0387
GSE20347 SLC16A4 9122 205234_at 0.0332 0.8347
GSE23400 SLC16A4 9122 205234_at -0.0170 0.5781
GSE26886 SLC16A4 9122 205234_at 0.5443 0.0035
GSE29001 SLC16A4 9122 205234_at 0.1382 0.4428
GSE38129 SLC16A4 9122 205234_at -0.3548 0.1827
GSE45670 SLC16A4 9122 205234_at -2.1343 0.0000
GSE53622 SLC16A4 9122 22950 -0.8143 0.0000
GSE53624 SLC16A4 9122 22950 -0.7833 0.0000
GSE63941 SLC16A4 9122 205234_at -5.7567 0.0002
GSE77861 SLC16A4 9122 205234_at 0.0686 0.5039
GSE97050 SLC16A4 9122 A_33_P3227920 -0.0308 0.9163
SRP007169 SLC16A4 9122 RNAseq 2.1972 0.0036
SRP064894 SLC16A4 9122 RNAseq -0.0972 0.7447
SRP133303 SLC16A4 9122 RNAseq -0.1085 0.5075
SRP159526 SLC16A4 9122 RNAseq -0.3611 0.3995
SRP193095 SLC16A4 9122 RNAseq 0.2835 0.1246
SRP219564 SLC16A4 9122 RNAseq 0.6202 0.3367
TCGA SLC16A4 9122 RNAseq -0.6162 0.0026

Upregulated datasets: 1; Downregulated datasets: 3.  


 

Survival by SLC16A4 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SLC16A4:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SLC16A4 9122 0 11 19
GSE20123 SLC16A4 9122 0 11 19
GSE43470 SLC16A4 9122 0 8 35
GSE46452 SLC16A4 9122 2 1 56
GSE47630 SLC16A4 9122 9 5 26
GSE54993 SLC16A4 9122 0 1 69
GSE54994 SLC16A4 9122 7 4 42
GSE60625 SLC16A4 9122 0 0 11
GSE74703 SLC16A4 9122 0 7 29
GSE74704 SLC16A4 9122 0 7 13
TCGA SLC16A4 9122 9 26 61

Total number of gains: 27; Total number of losses: 81; Total Number of normals: 380.  


 

Somatic mutations of SLC16A4:

 

Generating mutation plots.

 

Highly correlated genes for SLC16A4:

 

Showing top 20/1357 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SLC16A4GPIHBP10.8557303
SLC16A4HGF0.841137404
SLC16A4LRRN4CL0.819132707
SLC16A4TNFSF120.808263303
SLC16A4PEG30.800914606
SLC16A4GIMAP50.799225303
SLC16A4RCN20.798663303
SLC16A4CYYR10.793769505
SLC16A4FGF70.791675909
SLC16A4GNG20.789218505
SLC16A4SGCD0.783906707
SLC16A4SMIM100.783434505
SLC16A4MEOX20.781873807
SLC16A4CNRIP10.780611706
SLC16A4ABCA80.779497808
SLC16A4OGN0.779193808
SLC16A4EBF10.776799707
SLC16A4CD340.774761606
SLC16A4MGARP0.769096303
SLC16A4SLC39A130.766953303

For details and further investigation, click here