| Full name: PACRG antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 6q26 | ||
| Entrez ID: 285796 | HGNC ID: HGNC:27772 | Ensembl Gene: ENSG00000281692 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of PACRG-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | PACRG-AS1 | 285796 | 1561373_at | -0.0362 | 0.8888 | |
| GSE26886 | PACRG-AS1 | 285796 | 1561373_at | -0.0745 | 0.5503 | |
| GSE45670 | PACRG-AS1 | 285796 | 1561373_at | 0.2100 | 0.0073 | |
| GSE63941 | PACRG-AS1 | 285796 | 1561373_at | -0.0250 | 0.8788 | |
| GSE77861 | PACRG-AS1 | 285796 | 1561373_at | -0.0377 | 0.6413 |
Upregulated datasets: 0; Downregulated datasets: 0.
Copy number change of PACRG-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | PACRG-AS1 | 285796 | 2 | 5 | 23 | |
| GSE20123 | PACRG-AS1 | 285796 | 2 | 4 | 24 | |
| GSE43470 | PACRG-AS1 | 285796 | 3 | 0 | 40 | |
| GSE46452 | PACRG-AS1 | 285796 | 3 | 10 | 46 | |
| GSE47630 | PACRG-AS1 | 285796 | 8 | 5 | 27 | |
| GSE54993 | PACRG-AS1 | 285796 | 4 | 4 | 62 | |
| GSE54994 | PACRG-AS1 | 285796 | 8 | 9 | 36 | |
| GSE60625 | PACRG-AS1 | 285796 | 1 | 1 | 9 | |
| GSE74703 | PACRG-AS1 | 285796 | 3 | 0 | 33 | |
| GSE74704 | PACRG-AS1 | 285796 | 1 | 2 | 17 |
Total number of gains: 35; Total number of losses: 40; Total Number of normals: 317.
Somatic mutations of PACRG-AS1:
Generating mutation plots.
Highly correlated genes for PACRG-AS1:
Showing top 20/32 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| PACRG-AS1 | LINC01119 | 0.732383 | 3 | 0 | 3 |
| PACRG-AS1 | CCL25 | 0.678962 | 3 | 0 | 3 |
| PACRG-AS1 | WFDC9 | 0.671064 | 3 | 0 | 3 |
| PACRG-AS1 | TSGA13 | 0.655642 | 4 | 0 | 3 |
| PACRG-AS1 | SLC1A7 | 0.640777 | 3 | 0 | 3 |
| PACRG-AS1 | ZBTB12 | 0.622505 | 3 | 0 | 3 |
| PACRG-AS1 | TSPO2 | 0.619567 | 4 | 0 | 4 |
| PACRG-AS1 | RNASE3 | 0.602137 | 4 | 0 | 3 |
| PACRG-AS1 | DNAJC9-AS1 | 0.600932 | 4 | 0 | 4 |
| PACRG-AS1 | FCRLA | 0.594577 | 3 | 0 | 3 |
| PACRG-AS1 | LINC00689 | 0.593915 | 3 | 0 | 3 |
| PACRG-AS1 | HORMAD2 | 0.576573 | 4 | 0 | 3 |
| PACRG-AS1 | TPSG1 | 0.569748 | 3 | 0 | 3 |
| PACRG-AS1 | RORC | 0.559982 | 4 | 0 | 3 |
| PACRG-AS1 | KLK3 | 0.554654 | 4 | 0 | 3 |
| PACRG-AS1 | LGALS13 | 0.547574 | 3 | 0 | 3 |
| PACRG-AS1 | EDA2R | 0.546366 | 5 | 0 | 3 |
| PACRG-AS1 | PRAMEF11 | 0.545825 | 4 | 0 | 3 |
| PACRG-AS1 | AGXT2 | 0.540016 | 3 | 0 | 3 |
| PACRG-AS1 | LRRC43 | 0.538541 | 4 | 0 | 3 |
For details and further investigation, click here
