RBM23

 

Full name: RNA binding motif protein 23 Alias Symbol: FLJ10482|CAPERbeta
Type: protein-coding gene Cytoband: 14q11.2
Entrez ID: 55147 HGNC ID: HGNC:20155 Ensembl Gene: ENSG00000100461 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of RBM23:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 RBM23 55147 219816_s_at 0.1511 0.6209
GSE20347 RBM23 55147 219816_s_at 0.3176 0.0599
GSE23400 RBM23 55147 219816_s_at 0.2397 0.0002
GSE26886 RBM23 55147 219816_s_at -0.4986 0.0869
GSE29001 RBM23 55147 219816_s_at 0.3193 0.3672
GSE38129 RBM23 55147 219816_s_at 0.2374 0.0403
GSE45670 RBM23 55147 219816_s_at 0.1928 0.2126
GSE53622 RBM23 55147 64796 0.2311 0.0010
GSE53624 RBM23 55147 64796 0.0619 0.5522
GSE63941 RBM23 55147 219816_s_at 1.0779 0.0318
GSE77861 RBM23 55147 219816_s_at 0.1606 0.4333
GSE97050 RBM23 55147 A_24_P219156 0.2222 0.3390
SRP007169 RBM23 55147 RNAseq 0.1782 0.5665
SRP008496 RBM23 55147 RNAseq 0.1769 0.3134
SRP064894 RBM23 55147 RNAseq 0.0870 0.3463
SRP133303 RBM23 55147 RNAseq 0.0451 0.7707
SRP159526 RBM23 55147 RNAseq 0.3286 0.0066
SRP193095 RBM23 55147 RNAseq 0.0175 0.8192
SRP219564 RBM23 55147 RNAseq 0.0451 0.8077
TCGA RBM23 55147 RNAseq -0.0310 0.5108

Upregulated datasets: 1; Downregulated datasets: 0.  

 

Survival by RBM23 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of RBM23:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 RBM23 55147 9 2 19
GSE20123 RBM23 55147 9 2 19
GSE43470 RBM23 55147 7 2 34
GSE46452 RBM23 55147 17 2 40
GSE47630 RBM23 55147 11 10 19
GSE54993 RBM23 55147 3 11 56
GSE54994 RBM23 55147 18 5 30
GSE60625 RBM23 55147 0 2 9
GSE74703 RBM23 55147 6 2 28
GSE74704 RBM23 55147 4 1 15
TCGA RBM23 55147 26 16 54

Total number of gains: 110; Total number of losses: 55; Total Number of normals: 323.  

 

Somatic mutations of RBM23:

 

Generating mutation plots.

 

Highly correlated genes for RBM23:

 

Showing top 20/512 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
RBM23PPP1R80.762911303
RBM23DYRK20.735796303
RBM23PTER0.731969303
RBM23SPCS20.727172403
RBM23SLC2A4RG0.72207303
RBM23RLIM0.710211303
RBM23PSMD80.708786303
RBM23XRRA10.704606303
RBM23NRARP0.701113303
RBM23POLR2J0.698311504
RBM23ZDHHC70.695354303
RBM23TBC1D80.693006303
RBM23C2orf680.685372404
RBM23ARL13B0.683999404
RBM23HSD17B110.682793404
RBM23TSPAN90.680573404
RBM23ISY10.679647403
RBM23MAPKAP10.67795403
RBM23FAM32A0.677888403
RBM23NUP350.675183403

For details and further investigation, click here