TBC1D8

 

Full name: TBC1 domain family member 8 Alias Symbol: HBLP1|VRP|AD3|GRAMD8
Type: protein-coding gene Cytoband: 2q11.2
Entrez ID: 11138 HGNC ID: HGNC:17791 Ensembl Gene: ENSG00000204634 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of TBC1D8:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 TBC1D8 11138 204526_s_at 0.0832 0.8800
GSE20347 TBC1D8 11138 204526_s_at -0.0851 0.6917
GSE23400 TBC1D8 11138 204526_s_at 0.1254 0.2391
GSE26886 TBC1D8 11138 204526_s_at 0.5277 0.0478
GSE29001 TBC1D8 11138 204526_s_at -0.0119 0.9781
GSE38129 TBC1D8 11138 204526_s_at 0.0772 0.6820
GSE45670 TBC1D8 11138 204526_s_at 0.0385 0.8872
GSE53622 TBC1D8 11138 111963 -0.0073 0.9525
GSE53624 TBC1D8 11138 111963 0.0079 0.9344
GSE63941 TBC1D8 11138 204526_s_at 1.1766 0.1066
GSE77861 TBC1D8 11138 204526_s_at 0.3596 0.1666
GSE97050 TBC1D8 11138 A_33_P3309075 0.2009 0.6181
SRP007169 TBC1D8 11138 RNAseq 0.8555 0.0416
SRP008496 TBC1D8 11138 RNAseq 0.7500 0.0264
SRP064894 TBC1D8 11138 RNAseq -0.1829 0.4560
SRP133303 TBC1D8 11138 RNAseq -0.0851 0.6878
SRP159526 TBC1D8 11138 RNAseq 0.1020 0.7550
SRP193095 TBC1D8 11138 RNAseq -0.0178 0.8873
SRP219564 TBC1D8 11138 RNAseq 0.3776 0.5295
TCGA TBC1D8 11138 RNAseq -0.2092 0.0018

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by TBC1D8 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of TBC1D8:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 TBC1D8 11138 5 2 23
GSE20123 TBC1D8 11138 5 2 23
GSE43470 TBC1D8 11138 5 1 37
GSE46452 TBC1D8 11138 1 4 54
GSE47630 TBC1D8 11138 7 0 33
GSE54993 TBC1D8 11138 0 6 64
GSE54994 TBC1D8 11138 9 1 43
GSE60625 TBC1D8 11138 0 3 8
GSE74703 TBC1D8 11138 5 1 30
GSE74704 TBC1D8 11138 3 1 16
TCGA TBC1D8 11138 35 5 56

Total number of gains: 75; Total number of losses: 26; Total Number of normals: 387.  


 

Somatic mutations of TBC1D8:

 

Generating mutation plots.

 

Highly correlated genes for TBC1D8:

 

Showing top 20/315 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
TBC1D8THADA0.78703303
TBC1D8PPHLN10.765318303
TBC1D8NRARP0.762159303
TBC1D8ADO0.757844303
TBC1D8MRPS18B0.754339303
TBC1D8ZNF7660.736485303
TBC1D8NDUFS20.736049303
TBC1D8LRP5L0.735545303
TBC1D8SFSWAP0.733295404
TBC1D8CNOT20.729024403
TBC1D8NAPEPLD0.723632303
TBC1D8NAPB0.722397303
TBC1D8TRIM260.721354303
TBC1D8METTL230.718597303
TBC1D8GET40.717855303
TBC1D8ORAI30.713732303
TBC1D8BIRC60.712059303
TBC1D8NMT10.710064303
TBC1D8IAH10.709854303
TBC1D8FRA10AC10.707816303

For details and further investigation, click here