| Full name: RGMB antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 5q15 | ||
| Entrez ID: 503569 | HGNC ID: HGNC:48666 | Ensembl Gene: ENSG00000246763 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of RGMB-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RGMB-AS1 | 503569 | 1558899_s_at | 0.0162 | 0.9673 | |
| GSE26886 | RGMB-AS1 | 503569 | 1558899_s_at | 0.2068 | 0.1673 | |
| GSE45670 | RGMB-AS1 | 503569 | 1558899_s_at | 0.1830 | 0.0071 | |
| GSE53622 | RGMB-AS1 | 503569 | 77313 | -0.4954 | 0.0000 | |
| GSE53624 | RGMB-AS1 | 503569 | 77313 | -0.7265 | 0.0000 | |
| GSE63941 | RGMB-AS1 | 503569 | 1558899_s_at | 0.1562 | 0.3280 | |
| GSE77861 | RGMB-AS1 | 503569 | 1558899_s_at | 0.0083 | 0.9437 | |
| SRP133303 | RGMB-AS1 | 503569 | RNAseq | -0.5342 | 0.0948 | |
| SRP159526 | RGMB-AS1 | 503569 | RNAseq | 0.9318 | 0.2186 | |
| SRP219564 | RGMB-AS1 | 503569 | RNAseq | 0.2191 | 0.7647 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by RGMB-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of RGMB-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RGMB-AS1 | 503569 | 1 | 13 | 16 | |
| GSE20123 | RGMB-AS1 | 503569 | 1 | 13 | 16 | |
| GSE43470 | RGMB-AS1 | 503569 | 3 | 9 | 31 | |
| GSE46452 | RGMB-AS1 | 503569 | 0 | 28 | 31 | |
| GSE47630 | RGMB-AS1 | 503569 | 0 | 20 | 20 | |
| GSE54993 | RGMB-AS1 | 503569 | 8 | 1 | 61 | |
| GSE54994 | RGMB-AS1 | 503569 | 1 | 18 | 34 | |
| GSE60625 | RGMB-AS1 | 503569 | 0 | 0 | 11 | |
| GSE74703 | RGMB-AS1 | 503569 | 2 | 7 | 27 | |
| GSE74704 | RGMB-AS1 | 503569 | 1 | 7 | 12 |
Total number of gains: 17; Total number of losses: 116; Total Number of normals: 259.
Somatic mutations of RGMB-AS1:
Generating mutation plots.
Highly correlated genes for RGMB-AS1:
Showing top 20/54 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RGMB-AS1 | TAL2 | 0.677575 | 3 | 0 | 3 |
| RGMB-AS1 | CDKL2 | 0.671023 | 3 | 0 | 3 |
| RGMB-AS1 | STKLD1 | 0.662272 | 3 | 0 | 3 |
| RGMB-AS1 | MUL1 | 0.657766 | 3 | 0 | 3 |
| RGMB-AS1 | SLC6A12 | 0.649869 | 3 | 0 | 3 |
| RGMB-AS1 | GRIK5 | 0.625976 | 4 | 0 | 3 |
| RGMB-AS1 | PRKG2 | 0.619769 | 3 | 0 | 3 |
| RGMB-AS1 | GLRA2 | 0.614556 | 3 | 0 | 3 |
| RGMB-AS1 | NKX1-1 | 0.609823 | 4 | 0 | 3 |
| RGMB-AS1 | ANKRD53 | 0.609718 | 4 | 0 | 3 |
| RGMB-AS1 | IFT172 | 0.605292 | 3 | 0 | 3 |
| RGMB-AS1 | CA14 | 0.603227 | 4 | 0 | 3 |
| RGMB-AS1 | DMWD | 0.602564 | 4 | 0 | 4 |
| RGMB-AS1 | FRMD5 | 0.602396 | 4 | 0 | 3 |
| RGMB-AS1 | TTLL10 | 0.592353 | 5 | 0 | 5 |
| RGMB-AS1 | ASB17 | 0.590148 | 3 | 0 | 3 |
| RGMB-AS1 | ZBTB12 | 0.589701 | 3 | 0 | 3 |
| RGMB-AS1 | PRAMEF11 | 0.588433 | 5 | 0 | 3 |
| RGMB-AS1 | DLG5-AS1 | 0.583029 | 3 | 0 | 3 |
| RGMB-AS1 | CNTD2 | 0.571312 | 4 | 0 | 4 |
For details and further investigation, click here
