| Full name: intraflagellar transport 172 | Alias Symbol: SLB|wim|osm-1|NPHP17|BBS20 | ||
| Type: protein-coding gene | Cytoband: 2p23.3 | ||
| Entrez ID: 26160 | HGNC ID: HGNC:30391 | Ensembl Gene: ENSG00000138002 | OMIM ID: 607386 |
| Drug and gene relationship at DGIdb | |||
Expression of IFT172:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | IFT172 | 26160 | 226324_s_at | 0.1242 | 0.7503 | |
| GSE26886 | IFT172 | 26160 | 226324_s_at | -0.1112 | 0.6994 | |
| GSE45670 | IFT172 | 26160 | 226324_s_at | 0.0860 | 0.6682 | |
| GSE53622 | IFT172 | 26160 | 9115 | -0.1692 | 0.1354 | |
| GSE53624 | IFT172 | 26160 | 116303 | -0.0367 | 0.7013 | |
| GSE63941 | IFT172 | 26160 | 226324_s_at | -0.3254 | 0.5464 | |
| GSE77861 | IFT172 | 26160 | 226324_s_at | 0.1437 | 0.3648 | |
| GSE97050 | IFT172 | 26160 | A_23_P406135 | -0.1268 | 0.6886 | |
| SRP007169 | IFT172 | 26160 | RNAseq | 1.0885 | 0.0360 | |
| SRP008496 | IFT172 | 26160 | RNAseq | 1.2664 | 0.0012 | |
| SRP064894 | IFT172 | 26160 | RNAseq | 0.1841 | 0.3804 | |
| SRP133303 | IFT172 | 26160 | RNAseq | -0.0786 | 0.6584 | |
| SRP159526 | IFT172 | 26160 | RNAseq | 0.9726 | 0.0567 | |
| SRP193095 | IFT172 | 26160 | RNAseq | 0.2000 | 0.1447 | |
| SRP219564 | IFT172 | 26160 | RNAseq | -0.1302 | 0.6442 | |
| TCGA | IFT172 | 26160 | RNAseq | -0.1031 | 0.1293 |
Upregulated datasets: 2; Downregulated datasets: 0.
Survival by IFT172 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of IFT172:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | IFT172 | 26160 | 11 | 2 | 17 | |
| GSE20123 | IFT172 | 26160 | 11 | 2 | 17 | |
| GSE43470 | IFT172 | 26160 | 3 | 1 | 39 | |
| GSE46452 | IFT172 | 26160 | 2 | 4 | 53 | |
| GSE47630 | IFT172 | 26160 | 8 | 0 | 32 | |
| GSE54993 | IFT172 | 26160 | 0 | 6 | 64 | |
| GSE54994 | IFT172 | 26160 | 10 | 0 | 43 | |
| GSE60625 | IFT172 | 26160 | 0 | 3 | 8 | |
| GSE74703 | IFT172 | 26160 | 3 | 0 | 33 | |
| GSE74704 | IFT172 | 26160 | 9 | 1 | 10 | |
| TCGA | IFT172 | 26160 | 36 | 2 | 58 |
Total number of gains: 93; Total number of losses: 21; Total Number of normals: 374.
Somatic mutations of IFT172:
Generating mutation plots.
Highly correlated genes for IFT172:
Showing top 20/189 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| IFT172 | PSMC3IP | 0.713815 | 3 | 0 | 3 |
| IFT172 | CRNKL1 | 0.710174 | 3 | 0 | 3 |
| IFT172 | EGR2 | 0.693189 | 3 | 0 | 3 |
| IFT172 | PEG10 | 0.692068 | 4 | 0 | 4 |
| IFT172 | KIAA1324L | 0.685481 | 3 | 0 | 3 |
| IFT172 | FZD3 | 0.683683 | 3 | 0 | 3 |
| IFT172 | ENO2 | 0.674695 | 3 | 0 | 3 |
| IFT172 | PPP1R35 | 0.672689 | 3 | 0 | 3 |
| IFT172 | TERF2 | 0.665928 | 3 | 0 | 3 |
| IFT172 | NEDD9 | 0.665505 | 3 | 0 | 3 |
| IFT172 | IKZF4 | 0.662822 | 3 | 0 | 3 |
| IFT172 | KIAA0040 | 0.661973 | 3 | 0 | 3 |
| IFT172 | PRKG1 | 0.659994 | 3 | 0 | 3 |
| IFT172 | CXorf40B | 0.659739 | 3 | 0 | 3 |
| IFT172 | LDOC1 | 0.658167 | 3 | 0 | 3 |
| IFT172 | ERI3 | 0.65426 | 3 | 0 | 3 |
| IFT172 | GPR19 | 0.652588 | 3 | 0 | 3 |
| IFT172 | KDM4A | 0.645914 | 4 | 0 | 3 |
| IFT172 | STAG2 | 0.64556 | 3 | 0 | 3 |
| IFT172 | CDON | 0.645095 | 3 | 0 | 3 |
For details and further investigation, click here
