| Full name: ring finger protein 41 | Alias Symbol: SBBI03|NRDP1 | ||
| Type: protein-coding gene | Cytoband: 12q13.3 | ||
| Entrez ID: 10193 | HGNC ID: HGNC:18401 | Ensembl Gene: ENSG00000181852 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of RNF41:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RNF41 | 10193 | 201961_s_at | 0.1356 | 0.7000 | |
| GSE20347 | RNF41 | 10193 | 201961_s_at | -0.0706 | 0.5932 | |
| GSE23400 | RNF41 | 10193 | 201961_s_at | -0.0364 | 0.3791 | |
| GSE26886 | RNF41 | 10193 | 201961_s_at | -0.5040 | 0.0003 | |
| GSE29001 | RNF41 | 10193 | 201962_s_at | 0.3634 | 0.0787 | |
| GSE38129 | RNF41 | 10193 | 201961_s_at | -0.0300 | 0.7554 | |
| GSE45670 | RNF41 | 10193 | 201962_s_at | -0.0989 | 0.5060 | |
| GSE53622 | RNF41 | 10193 | 129553 | -0.0891 | 0.2277 | |
| GSE53624 | RNF41 | 10193 | 129553 | 0.0827 | 0.2712 | |
| GSE63941 | RNF41 | 10193 | 201961_s_at | 0.8305 | 0.0044 | |
| GSE77861 | RNF41 | 10193 | 201962_s_at | 0.2771 | 0.0586 | |
| GSE97050 | RNF41 | 10193 | A_24_P244470 | -0.3480 | 0.1734 | |
| SRP007169 | RNF41 | 10193 | RNAseq | -0.1565 | 0.6468 | |
| SRP008496 | RNF41 | 10193 | RNAseq | -0.0060 | 0.9748 | |
| SRP064894 | RNF41 | 10193 | RNAseq | -0.0351 | 0.7652 | |
| SRP133303 | RNF41 | 10193 | RNAseq | 0.2085 | 0.0143 | |
| SRP159526 | RNF41 | 10193 | RNAseq | 0.0095 | 0.9567 | |
| SRP193095 | RNF41 | 10193 | RNAseq | 0.1059 | 0.1308 | |
| SRP219564 | RNF41 | 10193 | RNAseq | 0.0449 | 0.8705 | |
| TCGA | RNF41 | 10193 | RNAseq | -0.0701 | 0.1608 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by RNF41 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of RNF41:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RNF41 | 10193 | 7 | 2 | 21 | |
| GSE20123 | RNF41 | 10193 | 7 | 1 | 22 | |
| GSE43470 | RNF41 | 10193 | 4 | 0 | 39 | |
| GSE46452 | RNF41 | 10193 | 8 | 1 | 50 | |
| GSE47630 | RNF41 | 10193 | 10 | 2 | 28 | |
| GSE54993 | RNF41 | 10193 | 0 | 5 | 65 | |
| GSE54994 | RNF41 | 10193 | 4 | 1 | 48 | |
| GSE60625 | RNF41 | 10193 | 0 | 0 | 11 | |
| GSE74703 | RNF41 | 10193 | 4 | 0 | 32 | |
| GSE74704 | RNF41 | 10193 | 4 | 1 | 15 | |
| TCGA | RNF41 | 10193 | 14 | 10 | 72 |
Total number of gains: 62; Total number of losses: 23; Total Number of normals: 403.
Somatic mutations of RNF41:
Generating mutation plots.
Highly correlated genes for RNF41:
Showing top 20/42 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RNF41 | SRRM5 | 0.664901 | 3 | 0 | 3 |
| RNF41 | ACTR3B | 0.645402 | 6 | 0 | 5 |
| RNF41 | LRRC18 | 0.639167 | 3 | 0 | 3 |
| RNF41 | ATG101 | 0.635229 | 5 | 0 | 4 |
| RNF41 | L2HGDH | 0.62752 | 3 | 0 | 3 |
| RNF41 | ZNF501 | 0.60547 | 4 | 0 | 3 |
| RNF41 | UQCRC1 | 0.604643 | 7 | 0 | 5 |
| RNF41 | PQBP1 | 0.595983 | 4 | 0 | 3 |
| RNF41 | TIGD7 | 0.59507 | 4 | 0 | 3 |
| RNF41 | MCRS1 | 0.58783 | 6 | 0 | 5 |
| RNF41 | UBL7 | 0.582515 | 4 | 0 | 3 |
| RNF41 | ZSCAN25 | 0.578973 | 3 | 0 | 3 |
| RNF41 | SLC27A5 | 0.578349 | 5 | 0 | 3 |
| RNF41 | FPR1 | 0.577723 | 3 | 0 | 3 |
| RNF41 | GPC3 | 0.575057 | 4 | 0 | 3 |
| RNF41 | COQ7 | 0.571695 | 5 | 0 | 3 |
| RNF41 | NFYC | 0.570919 | 4 | 0 | 3 |
| RNF41 | SLC2A8 | 0.570141 | 4 | 0 | 3 |
| RNF41 | TRDMT1 | 0.563656 | 3 | 0 | 3 |
| RNF41 | POC1A | 0.55891 | 3 | 0 | 3 |
For details and further investigation, click here
