| Full name: serine/arginine repetitive matrix 5 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 19q13.31 | ||
| Entrez ID: 100170229 | HGNC ID: HGNC:37248 | Ensembl Gene: ENSG00000226763 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of SRRM5:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SRRM5 | 100170229 | 1565849_a_at | 0.2165 | 0.3210 | |
| GSE26886 | SRRM5 | 100170229 | 1565849_a_at | 0.0890 | 0.6006 | |
| GSE45670 | SRRM5 | 100170229 | 1565849_a_at | 0.1940 | 0.0504 | |
| GSE63941 | SRRM5 | 100170229 | 1565849_a_at | 0.3862 | 0.0125 | |
| GSE77861 | SRRM5 | 100170229 | 1565849_a_at | 0.1266 | 0.1831 | |
| GSE97050 | SRRM5 | A_21_P0000007 | -0.1401 | 0.5996 | ||
| SRP133303 | SRRM5 | 100170229 | RNAseq | 0.2962 | 0.2695 | |
| SRP159526 | SRRM5 | 100170229 | RNAseq | 1.7421 | 0.0024 | |
| SRP219564 | SRRM5 | 100170229 | RNAseq | 0.5283 | 0.2070 | |
| TCGA | SRRM5 | 100170229 | RNAseq | 0.1904 | 0.2288 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by SRRM5 expression:
 |
| TCGA |
Note: Click image to view full size file.
Copy number change of SRRM5:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SRRM5 | 100170229 | 6 | 5 | 19 | |
| GSE20123 | SRRM5 | 100170229 | 5 | 4 | 21 | |
| GSE43470 | SRRM5 | 100170229 | 4 | 11 | 28 | |
| GSE46452 | SRRM5 | 100170229 | 45 | 1 | 13 | |
| GSE47630 | SRRM5 | 100170229 | 8 | 6 | 26 | |
| GSE54993 | SRRM5 | 100170229 | 17 | 4 | 49 | |
| GSE54994 | SRRM5 | 100170229 | 6 | 12 | 35 | |
| GSE60625 | SRRM5 | 100170229 | 9 | 0 | 2 | |
| GSE74703 | SRRM5 | 100170229 | 4 | 7 | 25 | |
| GSE74704 | SRRM5 | 100170229 | 4 | 2 | 14 | |
| TCGA | SRRM5 | 100170229 | 14 | 16 | 66 |
Total number of gains: 122; Total number of losses: 68; Total Number of normals: 298.
Somatic mutations of SRRM5:
Generating mutation plots.
Highly correlated genes for SRRM5:
Showing top 20/84 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SRRM5 | ACTR3B | 0.767586 | 3 | 0 | 3 |
| SRRM5 | CA6 | 0.727457 | 3 | 0 | 3 |
| SRRM5 | EDA | 0.700178 | 3 | 0 | 3 |
| SRRM5 | ANKRD53 | 0.694445 | 3 | 0 | 3 |
| SRRM5 | KIRREL2 | 0.678557 | 3 | 0 | 3 |
| SRRM5 | RNF41 | 0.664901 | 3 | 0 | 3 |
| SRRM5 | ICE1 | 0.664081 | 3 | 0 | 3 |
| SRRM5 | MEGF10 | 0.661077 | 4 | 0 | 3 |
| SRRM5 | GHSR | 0.657956 | 3 | 0 | 3 |
| SRRM5 | SLCO1A2 | 0.646416 | 3 | 0 | 3 |
| SRRM5 | MC1R | 0.646129 | 5 | 0 | 4 |
| SRRM5 | TMEM9 | 0.645669 | 3 | 0 | 3 |
| SRRM5 | SLC39A5 | 0.643267 | 3 | 0 | 3 |
| SRRM5 | ZNF169 | 0.641421 | 3 | 0 | 3 |
| SRRM5 | SYT1 | 0.638722 | 3 | 0 | 3 |
| SRRM5 | FCN2 | 0.638438 | 3 | 0 | 3 |
| SRRM5 | RAB3IL1 | 0.638369 | 4 | 0 | 3 |
| SRRM5 | PIK3CD | 0.630913 | 3 | 0 | 3 |
| SRRM5 | FUT1 | 0.62743 | 5 | 0 | 3 |
| SRRM5 | REM2 | 0.626812 | 3 | 0 | 3 |
For details and further investigation, click here
