S100A3

 

Full name: S100 calcium binding protein A3 Alias Symbol: 
Type: protein-coding gene Cytoband: 1q21.3
Entrez ID: 6274 HGNC ID: HGNC:10493 Ensembl Gene: ENSG00000188015 OMIM ID: 176992
Drug and gene relationship at DGIdb

 

Expression of S100A3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 S100A3 6274 206027_at 0.4573 0.6051
GSE20347 S100A3 6274 206027_at 0.0847 0.7386
GSE23400 S100A3 6274 206027_at 0.2098 0.0331
GSE26886 S100A3 6274 206027_at -0.3110 0.1365
GSE29001 S100A3 6274 206027_at -0.3270 0.3555
GSE38129 S100A3 6274 206027_at 0.3325 0.1071
GSE45670 S100A3 6274 206027_at 0.4848 0.0641
GSE53622 S100A3 6274 93606 0.1532 0.4068
GSE53624 S100A3 6274 93606 0.0823 0.5536
GSE63941 S100A3 6274 206027_at 0.1159 0.8221
GSE77861 S100A3 6274 206027_at 0.3053 0.4941
GSE97050 S100A3 6274 A_23_P104073 0.3014 0.3370
SRP064894 S100A3 6274 RNAseq 1.1382 0.0079
SRP133303 S100A3 6274 RNAseq 1.2788 0.0103
SRP159526 S100A3 6274 RNAseq -0.8086 0.0999
SRP219564 S100A3 6274 RNAseq -1.0072 0.1210
TCGA S100A3 6274 RNAseq 1.6610 0.0000

Upregulated datasets: 3; Downregulated datasets: 0.  


 

Survival by S100A3 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of S100A3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 S100A3 6274 14 0 16
GSE20123 S100A3 6274 14 0 16
GSE43470 S100A3 6274 6 2 35
GSE46452 S100A3 6274 2 1 56
GSE47630 S100A3 6274 15 0 25
GSE54993 S100A3 6274 0 4 66
GSE54994 S100A3 6274 16 0 37
GSE60625 S100A3 6274 0 0 11
GSE74703 S100A3 6274 6 1 29
GSE74704 S100A3 6274 7 0 13
TCGA S100A3 6274 39 1 56

Total number of gains: 119; Total number of losses: 9; Total Number of normals: 360.  


 

Somatic mutations of S100A3:

 

Generating mutation plots.

 

Highly correlated genes for S100A3:

 

Showing top 20/177 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
S100A3FAM210A0.665105303
S100A3F2RL10.662278404
S100A3SMPD30.658148303
S100A3CEACAM190.645578403
S100A3GJB30.6446531008
S100A3CYB5R20.641293503
S100A3ALOXE30.636987403
S100A3FERMT10.633086604
S100A3RGS200.632145906
S100A3SFN0.6256371009
S100A3HOXD110.624263303
S100A3SUGCT0.618369303
S100A3SH3D210.617444605
S100A3FAM83H0.616939605
S100A3KRTCAP30.613734303
S100A3BNC10.612952907
S100A3KCNK10.611874603
S100A3MTFP10.609928403
S100A3ARSJ0.608124403
S100A3PPP1R14C0.605472503

For details and further investigation, click here