GJB3

 

Full name: gap junction protein beta 3 Alias Symbol: CX31
Type: protein-coding gene Cytoband: 1p34.3
Entrez ID: 2707 HGNC ID: HGNC:4285 Ensembl Gene: ENSG00000188910 OMIM ID: 603324
Drug and gene relationship at DGIdb

 

Expression of GJB3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 GJB3 2707 205490_x_at 0.0123 0.9908
GSE20347 GJB3 2707 205490_x_at -0.4604 0.0312
GSE23400 GJB3 2707 205490_x_at 0.1880 0.0606
GSE26886 GJB3 2707 205490_x_at 0.0575 0.8331
GSE29001 GJB3 2707 205490_x_at -0.1200 0.6525
GSE38129 GJB3 2707 205490_x_at 0.1633 0.6904
GSE45670 GJB3 2707 205490_x_at 0.3386 0.1188
GSE53622 GJB3 2707 4565 0.1967 0.6006
GSE53624 GJB3 2707 4565 -0.1819 0.2538
GSE63941 GJB3 2707 205490_x_at 2.7018 0.0018
GSE77861 GJB3 2707 205490_x_at 0.0595 0.8462
GSE97050 GJB3 2707 A_24_P379233 0.5361 0.5830
SRP007169 GJB3 2707 RNAseq -0.8592 0.0532
SRP008496 GJB3 2707 RNAseq -1.1518 0.0000
SRP064894 GJB3 2707 RNAseq 0.3382 0.4356
SRP133303 GJB3 2707 RNAseq 0.0501 0.8536
SRP159526 GJB3 2707 RNAseq -0.5368 0.2385
SRP193095 GJB3 2707 RNAseq -0.1289 0.6607
SRP219564 GJB3 2707 RNAseq -0.4606 0.6670
TCGA GJB3 2707 RNAseq 0.9742 0.0000

Upregulated datasets: 1; Downregulated datasets: 1.  


 

Survival by GJB3 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of GJB3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 GJB3 2707 2 5 23
GSE20123 GJB3 2707 2 4 24
GSE43470 GJB3 2707 6 2 35
GSE46452 GJB3 2707 4 1 54
GSE47630 GJB3 2707 8 3 29
GSE54993 GJB3 2707 1 1 68
GSE54994 GJB3 2707 11 2 40
GSE60625 GJB3 2707 0 0 11
GSE74703 GJB3 2707 5 1 30
GSE74704 GJB3 2707 1 0 19
TCGA GJB3 2707 13 18 65

Total number of gains: 53; Total number of losses: 37; Total Number of normals: 398.  


 

Somatic mutations of GJB3:

 

Generating mutation plots.

 

Highly correlated genes for GJB3:

 

Showing top 20/632 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
GJB3GJB50.73948212012
GJB3TPRKB0.701136303
GJB3MACC10.698062303
GJB3S100A20.69634511011
GJB3CERS30.693966403
GJB3MAP70.690865706
GJB3ISY10.690596303
GJB3DUSP70.6881451008
GJB3ELOVL10.687821404
GJB3SLC25A100.685193505
GJB3ANKZF10.683735303
GJB3F2RL10.677566706
GJB3BNC10.67299908
GJB3CBLC0.6685631008
GJB3PRRG40.666465907
GJB3EGFL60.666124303
GJB3GNA150.663931009
GJB3WNT10A0.662666403
GJB3HOOK20.662543404
GJB3NDUFA90.659418303

For details and further investigation, click here