| Full name: tripartite motif containing 52 | Alias Symbol: RNF102 | ||
| Type: protein-coding gene | Cytoband: 5q35.3 | ||
| Entrez ID: 84851 | HGNC ID: HGNC:19024 | Ensembl Gene: ENSG00000183718 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of TRIM52:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TRIM52 | 84851 | 221897_at | -0.5520 | 0.2838 | |
| GSE20347 | TRIM52 | 84851 | 221897_at | -0.0564 | 0.7361 | |
| GSE23400 | TRIM52 | 84851 | 221897_at | 0.0460 | 0.2929 | |
| GSE26886 | TRIM52 | 84851 | 221897_at | 0.0556 | 0.8744 | |
| GSE29001 | TRIM52 | 84851 | 221897_at | -0.1120 | 0.6502 | |
| GSE38129 | TRIM52 | 84851 | 221897_at | -0.1722 | 0.4244 | |
| GSE45670 | TRIM52 | 84851 | 221897_at | -0.3014 | 0.1423 | |
| GSE63941 | TRIM52 | 84851 | 221897_at | -0.4598 | 0.3932 | |
| GSE77861 | TRIM52 | 84851 | 221897_at | 0.0109 | 0.9535 | |
| GSE97050 | TRIM52 | 84851 | A_23_P58579 | -0.0884 | 0.7265 | |
| SRP007169 | TRIM52 | 84851 | RNAseq | 0.7325 | 0.1793 | |
| SRP008496 | TRIM52 | 84851 | RNAseq | 0.5589 | 0.1634 | |
| SRP064894 | TRIM52 | 84851 | RNAseq | 0.0141 | 0.9303 | |
| SRP133303 | TRIM52 | 84851 | RNAseq | 0.0102 | 0.9591 | |
| SRP159526 | TRIM52 | 84851 | RNAseq | 0.0634 | 0.8514 | |
| SRP193095 | TRIM52 | 84851 | RNAseq | 0.0455 | 0.7288 | |
| SRP219564 | TRIM52 | 84851 | RNAseq | 0.1172 | 0.7237 | |
| TCGA | TRIM52 | 84851 | RNAseq | -0.1896 | 0.0373 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by TRIM52 expression:
 |
| TCGA |
Note: Click image to view full size file.
Copy number change of TRIM52:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TRIM52 | 84851 | 2 | 13 | 15 | |
| GSE20123 | TRIM52 | 84851 | 2 | 13 | 15 | |
| GSE43470 | TRIM52 | 84851 | 1 | 10 | 32 | |
| GSE46452 | TRIM52 | 84851 | 0 | 27 | 32 | |
| GSE47630 | TRIM52 | 84851 | 2 | 20 | 18 | |
| GSE54993 | TRIM52 | 84851 | 10 | 2 | 58 | |
| GSE54994 | TRIM52 | 84851 | 3 | 19 | 31 | |
| GSE60625 | TRIM52 | 84851 | 1 | 0 | 10 | |
| GSE74703 | TRIM52 | 84851 | 1 | 6 | 29 | |
| GSE74704 | TRIM52 | 84851 | 1 | 6 | 13 | |
| TCGA | TRIM52 | 84851 | 12 | 33 | 51 |
Total number of gains: 35; Total number of losses: 149; Total Number of normals: 304.
Somatic mutations of TRIM52:
Generating mutation plots.
Highly correlated genes for TRIM52:
Showing top 20/281 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TRIM52 | KBTBD11 | 0.752822 | 3 | 0 | 3 |
| TRIM52 | ECM2 | 0.681686 | 3 | 0 | 3 |
| TRIM52 | ABCA6 | 0.669958 | 4 | 0 | 3 |
| TRIM52 | SLC16A4 | 0.668642 | 4 | 0 | 4 |
| TRIM52 | SESN1 | 0.66827 | 4 | 0 | 3 |
| TRIM52 | ITPR1 | 0.655258 | 5 | 0 | 5 |
| TRIM52 | DAPK1 | 0.652854 | 5 | 0 | 4 |
| TRIM52 | PRKCA | 0.650149 | 4 | 0 | 4 |
| TRIM52 | ATRX | 0.646082 | 4 | 0 | 4 |
| TRIM52 | SBSPON | 0.645086 | 3 | 0 | 3 |
| TRIM52 | MAP1B | 0.642136 | 4 | 0 | 4 |
| TRIM52 | PID1 | 0.641912 | 4 | 0 | 3 |
| TRIM52 | TMEM178A | 0.63752 | 3 | 0 | 3 |
| TRIM52 | PRELP | 0.637187 | 4 | 0 | 3 |
| TRIM52 | SEMA3A | 0.635873 | 3 | 0 | 3 |
| TRIM52 | STXBP6 | 0.63537 | 4 | 0 | 3 |
| TRIM52 | ESRRG | 0.634554 | 4 | 0 | 4 |
| TRIM52 | PCGF5 | 0.631792 | 3 | 0 | 3 |
| TRIM52 | PKD2 | 0.631783 | 5 | 0 | 5 |
| TRIM52 | S100B | 0.631753 | 5 | 0 | 4 |
For details and further investigation, click here
