SERTAD2

 

Full name: SERTA domain containing 2 Alias Symbol: TRIP-Br2|KIAA0127|Sei-2
Type: protein-coding gene Cytoband: 2p14
Entrez ID: 9792 HGNC ID: HGNC:30784 Ensembl Gene: ENSG00000179833 OMIM ID: 617851
Drug and gene relationship at DGIdb

 

Expression of SERTAD2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SERTAD2 9792 202656_s_at 0.0326 0.9548
GSE20347 SERTAD2 9792 202656_s_at -0.4845 0.0067
GSE23400 SERTAD2 9792 202656_s_at -0.5101 0.0000
GSE26886 SERTAD2 9792 202656_s_at -1.2159 0.0000
GSE29001 SERTAD2 9792 202656_s_at -0.8386 0.0198
GSE38129 SERTAD2 9792 202656_s_at -0.2716 0.2201
GSE45670 SERTAD2 9792 202656_s_at -0.0272 0.8915
GSE53622 SERTAD2 9792 23515 -0.4798 0.0000
GSE53624 SERTAD2 9792 23515 -0.7042 0.0000
GSE63941 SERTAD2 9792 202656_s_at -0.1540 0.7731
GSE77861 SERTAD2 9792 202657_s_at -0.0661 0.8755
GSE97050 SERTAD2 9792 A_24_P294124 -0.3090 0.2630
SRP007169 SERTAD2 9792 RNAseq -1.9256 0.0000
SRP008496 SERTAD2 9792 RNAseq -1.7056 0.0000
SRP064894 SERTAD2 9792 RNAseq -0.9430 0.0000
SRP133303 SERTAD2 9792 RNAseq -0.0907 0.7129
SRP159526 SERTAD2 9792 RNAseq -0.4553 0.0413
SRP193095 SERTAD2 9792 RNAseq -1.0362 0.0000
SRP219564 SERTAD2 9792 RNAseq -0.7123 0.2088
TCGA SERTAD2 9792 RNAseq 0.2110 0.0015

Upregulated datasets: 0; Downregulated datasets: 4.  


 

Survival by SERTAD2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SERTAD2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SERTAD2 9792 12 0 18
GSE20123 SERTAD2 9792 12 0 18
GSE43470 SERTAD2 9792 6 0 37
GSE46452 SERTAD2 9792 2 3 54
GSE47630 SERTAD2 9792 8 0 32
GSE54993 SERTAD2 9792 0 6 64
GSE54994 SERTAD2 9792 12 0 41
GSE60625 SERTAD2 9792 0 3 8
GSE74703 SERTAD2 9792 6 0 30
GSE74704 SERTAD2 9792 10 0 10
TCGA SERTAD2 9792 36 2 58

Total number of gains: 104; Total number of losses: 14; Total Number of normals: 370.  


 

Somatic mutations of SERTAD2:

 

Generating mutation plots.

 

Highly correlated genes for SERTAD2:

 

Showing top 20/1048 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SERTAD2NUAK20.776099303
SERTAD2CCNYL10.771137303
SERTAD2PPP4R20.75139303
SERTAD2CWC250.742205303
SERTAD2OPHN10.738205303
SERTAD2VPS350.733258303
SERTAD2MTPN0.728748505
SERTAD2CAPNS20.72525303
SERTAD2DEF80.725195303
SERTAD2ANKRD310.724396404
SERTAD2ASPG0.719054303
SERTAD2PAIP20.715851303
SERTAD2C6orf1320.714758303
SERTAD2RAB8A0.709829303
SERTAD2VASN0.704827505
SERTAD2MAP4K50.702429303
SERTAD2CNFN0.70107404
SERTAD2CERS30.700884505
SERTAD2XG0.700488505
SERTAD2CCDC1200.700027303

For details and further investigation, click here