DEF8

 

Full name: differentially expressed in FDCP 8 homolog Alias Symbol: FLJ20186
Type: protein-coding gene Cytoband: 16q24.3
Entrez ID: 54849 HGNC ID: HGNC:25969 Ensembl Gene: ENSG00000140995 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of DEF8:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 DEF8 54849 225637_at -0.3350 0.2708
GSE20347 DEF8 54849 219646_at -0.1531 0.4182
GSE23400 DEF8 54849 219646_at -0.3517 0.0000
GSE26886 DEF8 54849 225637_at -1.0242 0.0001
GSE29001 DEF8 54849 219646_at -0.5107 0.0215
GSE38129 DEF8 54849 219646_at -0.0139 0.9352
GSE45670 DEF8 54849 225637_at -0.2014 0.1882
GSE53622 DEF8 54849 109489 -0.4356 0.0000
GSE53624 DEF8 54849 68092 -0.0242 0.7809
GSE63941 DEF8 54849 219646_at -0.7596 0.3393
GSE77861 DEF8 54849 225637_at -0.2953 0.1015
GSE97050 DEF8 54849 A_24_P193582 -0.3300 0.3389
SRP007169 DEF8 54849 RNAseq -1.6122 0.0002
SRP008496 DEF8 54849 RNAseq -1.2693 0.0000
SRP064894 DEF8 54849 RNAseq -0.3151 0.1677
SRP133303 DEF8 54849 RNAseq 0.3625 0.1482
SRP159526 DEF8 54849 RNAseq -0.0389 0.9018
SRP193095 DEF8 54849 RNAseq -0.1419 0.2840
SRP219564 DEF8 54849 RNAseq -0.4421 0.0927
TCGA DEF8 54849 RNAseq -0.1744 0.0008

Upregulated datasets: 0; Downregulated datasets: 3.  


 

Survival by DEF8 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of DEF8:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 DEF8 54849 4 3 23
GSE20123 DEF8 54849 4 3 23
GSE43470 DEF8 54849 1 13 29
GSE46452 DEF8 54849 38 1 20
GSE47630 DEF8 54849 11 9 20
GSE54993 DEF8 54849 3 4 63
GSE54994 DEF8 54849 9 11 33
GSE60625 DEF8 54849 4 0 7
GSE74703 DEF8 54849 1 9 26
GSE74704 DEF8 54849 3 1 16
TCGA DEF8 54849 26 15 55

Total number of gains: 104; Total number of losses: 69; Total Number of normals: 315.  


 

Somatic mutations of DEF8:

 

Generating mutation plots.

 

Highly correlated genes for DEF8:

 

Showing top 20/737 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
DEF8GOT10.740472303
DEF8DVL10.740385303
DEF8CYLD0.740223303
DEF8ST3GAL60.736848404
DEF8ABCG20.733445303
DEF8LNPEP0.72747303
DEF8SERTAD20.725195303
DEF8ZNF910.714209404
DEF8ARSG0.711302403
DEF8ZNF6620.710502606
DEF8SFTA20.709948404
DEF8DIAPH10.709452404
DEF8SCAF40.705097303
DEF8TPCN10.704538808
DEF8PKN20.701417403
DEF8GRHPR0.698346303
DEF8AP3M10.696269303
DEF8SLC46A20.687967606
DEF8VPS530.687362303
DEF8FAM98C0.686102404

For details and further investigation, click here