SH2D1B

 

Full name: SH2 domain containing 1B Alias Symbol: EAT2
Type: protein-coding gene Cytoband: 1q23.3
Entrez ID: 117157 HGNC ID: HGNC:30416 Ensembl Gene: ENSG00000198574 OMIM ID: 608510
Drug and gene relationship at DGIdb

 

SH2D1B involved pathways:

KEGG pathway Description View
hsa04650Natural killer cell mediated cytotoxicity

 

Expression of SH2D1B:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SH2D1B 117157 1553177_at -0.3930 0.3154
GSE26886 SH2D1B 117157 1553177_at -1.9208 0.0002
GSE45670 SH2D1B 117157 1553177_at -0.0409 0.9228
GSE53622 SH2D1B 117157 25569 -0.0742 0.3974
GSE53624 SH2D1B 117157 25569 -0.4323 0.0000
GSE63941 SH2D1B 117157 1553177_at -0.1335 0.4234
GSE77861 SH2D1B 117157 1553177_at -0.1825 0.0432
GSE97050 SH2D1B 117157 A_23_P351148 -0.0465 0.9100
SRP133303 SH2D1B 117157 RNAseq -1.2028 0.0108
SRP159526 SH2D1B 117157 RNAseq -1.9482 0.0190
TCGA SH2D1B 117157 RNAseq -0.5148 0.2438

Upregulated datasets: 0; Downregulated datasets: 3.  


 

Survival by SH2D1B expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SH2D1B:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SH2D1B 117157 10 0 20
GSE20123 SH2D1B 117157 10 0 20
GSE43470 SH2D1B 117157 7 2 34
GSE46452 SH2D1B 117157 2 1 56
GSE47630 SH2D1B 117157 14 0 26
GSE54993 SH2D1B 117157 0 5 65
GSE54994 SH2D1B 117157 16 0 37
GSE60625 SH2D1B 117157 0 0 11
GSE74703 SH2D1B 117157 7 2 27
GSE74704 SH2D1B 117157 4 0 16
TCGA SH2D1B 117157 43 4 49

Total number of gains: 113; Total number of losses: 14; Total Number of normals: 361.  


 

Somatic mutations of SH2D1B:

 

Generating mutation plots.

 

Highly correlated genes for SH2D1B:

 

Showing top 20/296 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SH2D1BANKRD330.813403303
SH2D1BIL22RA20.774822303
SH2D1BCD300LG0.768793404
SH2D1BFGF220.767175303
SH2D1BSHOC20.763619303
SH2D1BCATSPER30.760228303
SH2D1BMAP3K90.758352303
SH2D1BMFSD10.752593403
SH2D1BCCDC1570.751488303
SH2D1BATP10B0.750855303
SH2D1BGPT20.749339303
SH2D1BSLC6A180.747335303
SH2D1BRHBG0.744432303
SH2D1BABCD30.744428403
SH2D1BSPNS20.744426303
SH2D1BRPIA0.742703303
SH2D1BERMP10.741222403
SH2D1BGGT60.739952504
SH2D1BTNR0.735785303
SH2D1BCABP70.727905303

For details and further investigation, click here