SHCBP1L

 

Full name: SHC binding and spindle associated 1 like Alias Symbol: 
Type: protein-coding gene Cytoband: 1q25.3
Entrez ID: 81626 HGNC ID: HGNC:16788 Ensembl Gene: ENSG00000157060 OMIM ID: 
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of SHCBP1L:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SHCBP1L 81626 220996_s_at -0.1355 0.5325
GSE20347 SHCBP1L 81626 220996_s_at -0.0386 0.5365
GSE23400 SHCBP1L 81626 220996_s_at -0.0343 0.1732
GSE26886 SHCBP1L 81626 220996_s_at -0.2168 0.0111
GSE29001 SHCBP1L 81626 220996_s_at -0.1642 0.1720
GSE38129 SHCBP1L 81626 220996_s_at -0.1339 0.0222
GSE45670 SHCBP1L 81626 220996_s_at -0.0391 0.7065
GSE53622 SHCBP1L 81626 53471 -0.4425 0.0009
GSE53624 SHCBP1L 81626 53471 -0.0799 0.2683
GSE63941 SHCBP1L 81626 220996_s_at 0.1478 0.1715
GSE77861 SHCBP1L 81626 220996_s_at -0.0541 0.5285

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by SHCBP1L expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  


Copy number change of SHCBP1L:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SHCBP1L 81626 12 0 18
GSE20123 SHCBP1L 81626 12 0 18
GSE43470 SHCBP1L 81626 7 1 35
GSE46452 SHCBP1L 81626 3 1 55
GSE47630 SHCBP1L 81626 14 0 26
GSE54993 SHCBP1L 81626 0 6 64
GSE54994 SHCBP1L 81626 15 0 38
GSE60625 SHCBP1L 81626 0 0 11
GSE74703 SHCBP1L 81626 7 1 28
GSE74704 SHCBP1L 81626 5 0 15
TCGA SHCBP1L 81626 40 3 53

Total number of gains: 115; Total number of losses: 12; Total Number of normals: 361.  


 

Somatic mutations of SHCBP1L:

 

Generating mutation plots.

 

Highly correlated genes for SHCBP1L:

 

Showing top 20/559 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SHCBP1LSHOX0.728736404
SHCBP1LGRPR0.698419404
SHCBP1LTAAR20.673866403
SHCBP1LNPY5R0.673674303
SHCBP1LCETN10.660249303
SHCBP1LPDX10.658929403
SHCBP1LPDC0.647107404
SHCBP1LCD1B0.645654505
SHCBP1LKRTAP5-80.645289505
SHCBP1LKCNG10.644019403
SHCBP1LDBH0.642035303
SHCBP1LMSI10.641026504
SHCBP1LNCAN0.639785404
SHCBP1LFNDC80.638833505
SHCBP1LXPNPEP20.634324504
SHCBP1LAQP60.632649504
SHCBP1LSRPK30.631209403
SHCBP1LMYBPH0.628124303
SHCBP1LPSG70.626775303
SHCBP1LSERPIND10.625468403

For details and further investigation, click here