SLC23A2

 

Full name: solute carrier family 23 member 2 Alias Symbol: SVCT2|KIAA0238|YSPL2
Type: protein-coding gene Cytoband: 20p13
Entrez ID: 9962 HGNC ID: HGNC:10973 Ensembl Gene: ENSG00000089057 OMIM ID: 603791
Drug and gene relationship at DGIdb

 

Expression of SLC23A2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SLC23A2 9962 209236_at 0.7618 0.0709
GSE20347 SLC23A2 9962 209236_at 0.5145 0.0002
GSE23400 SLC23A2 9962 209236_at 0.2496 0.0000
GSE26886 SLC23A2 9962 209236_at 0.1807 0.2252
GSE29001 SLC23A2 9962 209236_at 0.3820 0.1533
GSE38129 SLC23A2 9962 209236_at 0.3537 0.0193
GSE45670 SLC23A2 9962 209236_at 0.0838 0.7067
GSE53622 SLC23A2 9962 147398 0.3390 0.0001
GSE53624 SLC23A2 9962 147398 0.4390 0.0000
GSE63941 SLC23A2 9962 209236_at -1.1676 0.0088
GSE77861 SLC23A2 9962 209236_at 0.4022 0.0915
GSE97050 SLC23A2 9962 A_24_P254278 0.0689 0.8301
SRP007169 SLC23A2 9962 RNAseq 0.6279 0.2296
SRP008496 SLC23A2 9962 RNAseq 0.8932 0.0042
SRP064894 SLC23A2 9962 RNAseq 0.4954 0.0239
SRP133303 SLC23A2 9962 RNAseq 0.1914 0.3702
SRP159526 SLC23A2 9962 RNAseq 0.4511 0.0475
SRP193095 SLC23A2 9962 RNAseq 0.8719 0.0000
SRP219564 SLC23A2 9962 RNAseq 0.5851 0.0173
TCGA SLC23A2 9962 RNAseq -0.0924 0.1290

Upregulated datasets: 0; Downregulated datasets: 1.  

 

Survival by SLC23A2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of SLC23A2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SLC23A2 9962 10 3 17
GSE20123 SLC23A2 9962 10 3 17
GSE43470 SLC23A2 9962 10 1 32
GSE46452 SLC23A2 9962 26 1 32
GSE47630 SLC23A2 9962 18 4 18
GSE54993 SLC23A2 9962 2 14 54
GSE54994 SLC23A2 9962 24 2 27
GSE60625 SLC23A2 9962 0 0 11
GSE74703 SLC23A2 9962 9 1 26
GSE74704 SLC23A2 9962 5 1 14
TCGA SLC23A2 9962 40 11 45

Total number of gains: 154; Total number of losses: 41; Total Number of normals: 293.  

 

Somatic mutations of SLC23A2:

 

Generating mutation plots.

 

Highly correlated genes for SLC23A2:

 

Showing top 20/744 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SLC23A2SIX50.771977303
SLC23A2MZT10.742975303
SLC23A2KHNYN0.734476303
SLC23A2TANC20.733824404
SLC23A2BCORL10.724025404
SLC23A2ZNF3190.712185303
SLC23A2DHX330.706433303
SLC23A2SDCBP0.703171303
SLC23A2SLC7A6OS0.696508303
SLC23A2TP53I130.694793504
SLC23A2INO800.693668303
SLC23A2KDM6B0.687704403
SLC23A2EYA40.684394303
SLC23A2KANK40.681904303
SLC23A2NEIL20.679572303
SLC23A2CASC40.677584303
SLC23A2PKNOX10.673236303
SLC23A2NEURL40.671991303
SLC23A2CPNE80.671562303
SLC23A2TMSB100.669609404

For details and further investigation, click here