| Full name: solute carrier organic anion transporter family member 1C1 | Alias Symbol: OATP-F|OATP1C1|OATP1 | ||
| Type: protein-coding gene | Cytoband: 12p12.2 | ||
| Entrez ID: 53919 | HGNC ID: HGNC:13819 | Ensembl Gene: ENSG00000139155 | OMIM ID: 613389 |
| Drug and gene relationship at DGIdb | |||
Expression of SLCO1C1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SLCO1C1 | 53919 | 220460_at | 0.0458 | 0.8648 | |
| GSE20347 | SLCO1C1 | 53919 | 220460_at | 0.0741 | 0.1921 | |
| GSE23400 | SLCO1C1 | 53919 | 220460_at | -0.0002 | 0.9955 | |
| GSE26886 | SLCO1C1 | 53919 | 220460_at | -0.1421 | 0.1793 | |
| GSE29001 | SLCO1C1 | 53919 | 220460_at | 0.0277 | 0.9122 | |
| GSE38129 | SLCO1C1 | 53919 | 220460_at | -0.0238 | 0.7763 | |
| GSE45670 | SLCO1C1 | 53919 | 220460_at | -0.0080 | 0.9589 | |
| GSE53622 | SLCO1C1 | 53919 | 153373 | -0.4437 | 0.0016 | |
| GSE53624 | SLCO1C1 | 53919 | 153373 | -0.6842 | 0.0000 | |
| GSE63941 | SLCO1C1 | 53919 | 220460_at | -0.1156 | 0.4847 | |
| GSE77861 | SLCO1C1 | 53919 | 220460_at | -0.0376 | 0.6841 | |
| SRP133303 | SLCO1C1 | 53919 | RNAseq | 0.3442 | 0.4895 | |
| TCGA | SLCO1C1 | 53919 | RNAseq | -0.6275 | 0.2329 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by SLCO1C1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SLCO1C1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SLCO1C1 | 53919 | 9 | 2 | 19 | |
| GSE20123 | SLCO1C1 | 53919 | 9 | 2 | 19 | |
| GSE43470 | SLCO1C1 | 53919 | 9 | 4 | 30 | |
| GSE46452 | SLCO1C1 | 53919 | 10 | 1 | 48 | |
| GSE47630 | SLCO1C1 | 53919 | 14 | 1 | 25 | |
| GSE54993 | SLCO1C1 | 53919 | 1 | 9 | 60 | |
| GSE54994 | SLCO1C1 | 53919 | 12 | 2 | 39 | |
| GSE60625 | SLCO1C1 | 53919 | 0 | 1 | 10 | |
| GSE74703 | SLCO1C1 | 53919 | 9 | 3 | 24 | |
| GSE74704 | SLCO1C1 | 53919 | 6 | 1 | 13 | |
| TCGA | SLCO1C1 | 53919 | 42 | 5 | 49 |
Total number of gains: 121; Total number of losses: 31; Total Number of normals: 336.
Somatic mutations of SLCO1C1:
Generating mutation plots.
Highly correlated genes for SLCO1C1:
Showing top 20/335 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SLCO1C1 | KIF5A | 0.756032 | 4 | 0 | 4 |
| SLCO1C1 | OR10C1 | 0.727422 | 4 | 0 | 4 |
| SLCO1C1 | KIR2DL5A | 0.720367 | 4 | 0 | 4 |
| SLCO1C1 | SLC5A4 | 0.720286 | 4 | 0 | 4 |
| SLCO1C1 | CHST5 | 0.703828 | 4 | 0 | 4 |
| SLCO1C1 | NTNG1 | 0.702231 | 3 | 0 | 3 |
| SLCO1C1 | PRR34 | 0.694254 | 3 | 0 | 3 |
| SLCO1C1 | LLGL1 | 0.691274 | 3 | 0 | 3 |
| SLCO1C1 | RRH | 0.688412 | 3 | 0 | 3 |
| SLCO1C1 | NEUROD6 | 0.682205 | 4 | 0 | 4 |
| SLCO1C1 | RUNX2 | 0.68059 | 3 | 0 | 3 |
| SLCO1C1 | GDF9 | 0.680414 | 3 | 0 | 3 |
| SLCO1C1 | CHRM2 | 0.678542 | 3 | 0 | 3 |
| SLCO1C1 | CDC25C | 0.669005 | 3 | 0 | 3 |
| SLCO1C1 | LUZP4 | 0.667975 | 4 | 0 | 4 |
| SLCO1C1 | CHRNA6 | 0.665964 | 3 | 0 | 3 |
| SLCO1C1 | SLC6A12 | 0.665336 | 3 | 0 | 3 |
| SLCO1C1 | PLIN1 | 0.664871 | 4 | 0 | 4 |
| SLCO1C1 | CLCN4 | 0.664146 | 3 | 0 | 3 |
| SLCO1C1 | COLEC10 | 0.663048 | 4 | 0 | 4 |
For details and further investigation, click here
