SLCO5A1

 

Full name: solute carrier organic anion transporter family member 5A1 Alias Symbol: OATPRP4|OATP-J|OATP5A1
Type: protein-coding gene Cytoband: 8q13.3
Entrez ID: 81796 HGNC ID: HGNC:19046 Ensembl Gene: ENSG00000137571 OMIM ID: 613543
Drug and gene relationship at DGIdb

 

Expression of SLCO5A1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SLCO5A1 81796 230650_at 0.2683 0.5675
GSE20347 SLCO5A1 81796 220984_s_at -0.0730 0.1501
GSE23400 SLCO5A1 81796 220984_s_at -0.2597 0.0000
GSE26886 SLCO5A1 81796 220984_s_at 0.0370 0.8198
GSE29001 SLCO5A1 81796 220984_s_at -0.2119 0.1505
GSE38129 SLCO5A1 81796 220984_s_at -0.2117 0.0011
GSE45670 SLCO5A1 81796 220984_s_at 0.0715 0.4600
GSE53622 SLCO5A1 81796 106706 0.5055 0.0061
GSE53624 SLCO5A1 81796 106706 0.5628 0.0001
GSE63941 SLCO5A1 81796 220984_s_at 0.0129 0.9377
GSE77861 SLCO5A1 81796 220984_s_at -0.0599 0.5573
GSE97050 SLCO5A1 81796 A_23_P135669 -0.5557 0.3796
SRP133303 SLCO5A1 81796 RNAseq 1.1329 0.0020
SRP159526 SLCO5A1 81796 RNAseq 0.9685 0.1713
SRP193095 SLCO5A1 81796 RNAseq 0.0792 0.7662
TCGA SLCO5A1 81796 RNAseq 0.0310 0.9426

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by SLCO5A1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SLCO5A1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SLCO5A1 81796 15 1 14
GSE20123 SLCO5A1 81796 16 1 13
GSE43470 SLCO5A1 81796 18 1 24
GSE46452 SLCO5A1 81796 20 2 37
GSE47630 SLCO5A1 81796 23 1 16
GSE54993 SLCO5A1 81796 0 19 51
GSE54994 SLCO5A1 81796 30 0 23
GSE60625 SLCO5A1 81796 0 4 7
GSE74703 SLCO5A1 81796 15 1 20
GSE74704 SLCO5A1 81796 11 0 9
TCGA SLCO5A1 81796 51 2 43

Total number of gains: 199; Total number of losses: 32; Total Number of normals: 257.  


 

Somatic mutations of SLCO5A1:

 

Generating mutation plots.

 

Highly correlated genes for SLCO5A1:

 

Showing top 20/322 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SLCO5A1RNF1220.74333303
SLCO5A1USP20.731328303
SLCO5A1RIT20.708026303
SLCO5A1JAK30.704921303
SLCO5A1DUSP210.694115303
SLCO5A1PTP4A30.682626303
SLCO5A1ARHGAP440.682286303
SLCO5A1PLA2G50.667672505
SLCO5A1ZNF7170.665398303
SLCO5A1CT550.662651303
SLCO5A1CDK200.66005503
SLCO5A1SLC17A70.65982504
SLCO5A1HOXB10.656559303
SLCO5A1EPM2A0.652213303
SLCO5A1COX6A20.651945303
SLCO5A1CCDC300.649206403
SLCO5A1GRPR0.648225605
SLCO5A1ZC4H20.647978303
SLCO5A1TRAF50.644179403
SLCO5A1CSH10.644125504

For details and further investigation, click here