| Full name: coiled-coil domain containing 30 | Alias Symbol: FLJ20972|PFD6L|LOC728621 | ||
| Type: protein-coding gene | Cytoband: 1p34.2 | ||
| Entrez ID: 728621 | HGNC ID: HGNC:26103 | Ensembl Gene: ENSG00000186409 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of CCDC30:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CCDC30 | 728621 | 221171_at | -0.0470 | 0.8648 | |
| GSE20347 | CCDC30 | 728621 | 221171_at | 0.0126 | 0.9106 | |
| GSE23400 | CCDC30 | 728621 | 221171_at | -0.1479 | 0.0060 | |
| GSE26886 | CCDC30 | 728621 | 221171_at | -0.0454 | 0.7491 | |
| GSE29001 | CCDC30 | 728621 | 221171_at | -0.1489 | 0.4226 | |
| GSE38129 | CCDC30 | 728621 | 221171_at | -0.0959 | 0.3869 | |
| GSE45670 | CCDC30 | 728621 | 221171_at | 0.1015 | 0.2951 | |
| GSE53622 | CCDC30 | 728621 | 21221 | -0.4903 | 0.0001 | |
| GSE53624 | CCDC30 | 728621 | 21221 | -0.5295 | 0.0000 | |
| GSE63941 | CCDC30 | 728621 | 221171_at | 0.0251 | 0.9030 | |
| GSE77861 | CCDC30 | 728621 | 221171_at | -0.0839 | 0.3671 | |
| GSE97050 | CCDC30 | 728621 | A_24_P349196 | -0.3115 | 0.2494 | |
| SRP007169 | CCDC30 | 728621 | RNAseq | -0.0927 | 0.8866 | |
| SRP064894 | CCDC30 | 728621 | RNAseq | 0.2918 | 0.1224 | |
| SRP133303 | CCDC30 | 728621 | RNAseq | -0.1085 | 0.5298 | |
| SRP159526 | CCDC30 | 728621 | RNAseq | 0.6658 | 0.1991 | |
| SRP193095 | CCDC30 | 728621 | RNAseq | 0.0290 | 0.8327 | |
| SRP219564 | CCDC30 | 728621 | RNAseq | -0.2864 | 0.5147 | |
| TCGA | CCDC30 | 728621 | RNAseq | -0.5793 | 0.0146 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by CCDC30 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CCDC30:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CCDC30 | 728621 | 4 | 3 | 23 | |
| GSE20123 | CCDC30 | 728621 | 3 | 2 | 25 | |
| GSE43470 | CCDC30 | 728621 | 7 | 2 | 34 | |
| GSE46452 | CCDC30 | 728621 | 3 | 1 | 55 | |
| GSE47630 | CCDC30 | 728621 | 9 | 2 | 29 | |
| GSE54993 | CCDC30 | 728621 | 0 | 2 | 68 | |
| GSE54994 | CCDC30 | 728621 | 14 | 2 | 37 | |
| GSE60625 | CCDC30 | 728621 | 0 | 0 | 11 | |
| GSE74703 | CCDC30 | 728621 | 6 | 1 | 29 | |
| GSE74704 | CCDC30 | 728621 | 1 | 0 | 19 | |
| TCGA | CCDC30 | 728621 | 13 | 16 | 67 |
Total number of gains: 60; Total number of losses: 31; Total Number of normals: 397.
Somatic mutations of CCDC30:
Generating mutation plots.
Highly correlated genes for CCDC30:
Showing top 20/950 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CCDC30 | EPHA3 | 0.750252 | 3 | 0 | 3 |
| CCDC30 | MAPK4 | 0.748393 | 3 | 0 | 3 |
| CCDC30 | TPPP | 0.738615 | 3 | 0 | 3 |
| CCDC30 | EBF2 | 0.724394 | 3 | 0 | 3 |
| CCDC30 | CRP | 0.722287 | 5 | 0 | 5 |
| CCDC30 | CLCA1 | 0.719428 | 5 | 0 | 5 |
| CCDC30 | CA7 | 0.715473 | 6 | 0 | 5 |
| CCDC30 | TCP10L | 0.711202 | 5 | 0 | 5 |
| CCDC30 | NKAIN1 | 0.710576 | 4 | 0 | 4 |
| CCDC30 | FAM13C | 0.710069 | 4 | 0 | 4 |
| CCDC30 | CBL | 0.70957 | 5 | 0 | 5 |
| CCDC30 | HOXA3 | 0.699645 | 5 | 0 | 4 |
| CCDC30 | FRAS1 | 0.696258 | 5 | 0 | 5 |
| CCDC30 | CNTF | 0.695715 | 4 | 0 | 3 |
| CCDC30 | ALDH1A2 | 0.695637 | 4 | 0 | 3 |
| CCDC30 | GML | 0.694161 | 7 | 0 | 6 |
| CCDC30 | ART4 | 0.692736 | 7 | 0 | 7 |
| CCDC30 | PODNL1 | 0.692212 | 4 | 0 | 4 |
| CCDC30 | IGH | 0.691695 | 3 | 0 | 3 |
| CCDC30 | DPF3 | 0.688552 | 7 | 0 | 7 |
For details and further investigation, click here
