| Full name: transmembrane protein 239 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 20p13 | ||
| Entrez ID: 100288797 | HGNC ID: HGNC:40044 | Ensembl Gene: ENSG00000198326 | OMIM ID: |
Expression of TMEM239:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TMEM239 | 100288797 | 1554042_s_at | 0.1438 | 0.5436 | |
| GSE26886 | TMEM239 | 100288797 | 1554042_s_at | 0.0573 | 0.5760 | |
| GSE45670 | TMEM239 | 100288797 | 1554042_s_at | 0.1124 | 0.1260 | |
| GSE63941 | TMEM239 | 100288797 | 1554042_s_at | 0.1195 | 0.4330 | |
| GSE77861 | TMEM239 | 100288797 | 1554042_s_at | -0.0641 | 0.5277 | |
| GSE97050 | TMEM239 | 100288797 | A_33_P3232871 | 0.3060 | 0.3274 | |
| SRP133303 | TMEM239 | 100288797 | RNAseq | 0.0566 | 0.8019 |
Upregulated datasets: 0; Downregulated datasets: 0.
Copy number change of TMEM239:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TMEM239 | 100288797 | 12 | 3 | 15 | |
| GSE20123 | TMEM239 | 100288797 | 13 | 3 | 14 | |
| GSE43470 | TMEM239 | 100288797 | 10 | 1 | 32 | |
| GSE46452 | TMEM239 | 100288797 | 26 | 1 | 32 | |
| GSE47630 | TMEM239 | 100288797 | 18 | 4 | 18 | |
| GSE54993 | TMEM239 | 100288797 | 2 | 14 | 54 | |
| GSE54994 | TMEM239 | 100288797 | 24 | 2 | 27 | |
| GSE60625 | TMEM239 | 100288797 | 0 | 0 | 11 | |
| GSE74703 | TMEM239 | 100288797 | 9 | 1 | 26 | |
| GSE74704 | TMEM239 | 100288797 | 8 | 1 | 11 | |
| TCGA | TMEM239 | 100288797 | 40 | 11 | 45 |
Total number of gains: 162; Total number of losses: 41; Total Number of normals: 285.
Somatic mutations of TMEM239:
Generating mutation plots.
Highly correlated genes for TMEM239:
Showing top 20/98 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TMEM239 | SLC24A4 | 0.736685 | 3 | 0 | 3 |
| TMEM239 | SYT3 | 0.708403 | 3 | 0 | 3 |
| TMEM239 | BCL6B | 0.707721 | 3 | 0 | 3 |
| TMEM239 | VRTN | 0.701058 | 3 | 0 | 3 |
| TMEM239 | PRRG3 | 0.691796 | 3 | 0 | 3 |
| TMEM239 | FOXE3 | 0.691775 | 3 | 0 | 3 |
| TMEM239 | FAM178B | 0.687588 | 3 | 0 | 3 |
| TMEM239 | NPM2 | 0.682103 | 3 | 0 | 3 |
| TMEM239 | OR1F1 | 0.680142 | 3 | 0 | 3 |
| TMEM239 | DPYSL4 | 0.679983 | 3 | 0 | 3 |
| TMEM239 | FER1L5 | 0.676466 | 3 | 0 | 3 |
| TMEM239 | C19orf81 | 0.670813 | 3 | 0 | 3 |
| TMEM239 | ZFHX2 | 0.670665 | 4 | 0 | 4 |
| TMEM239 | CHRNB2 | 0.668899 | 3 | 0 | 3 |
| TMEM239 | FGF17 | 0.665221 | 3 | 0 | 3 |
| TMEM239 | OR10H1 | 0.665208 | 4 | 0 | 3 |
| TMEM239 | PNPLA5 | 0.655264 | 3 | 0 | 3 |
| TMEM239 | CELA3B | 0.653205 | 3 | 0 | 3 |
| TMEM239 | HRK | 0.651083 | 3 | 0 | 3 |
| TMEM239 | SLC19A3 | 0.64786 | 3 | 0 | 3 |
For details and further investigation, click here
