| Full name: TATA element modulatory factor 1 | Alias Symbol: ARA160|TMF | ||
| Type: protein-coding gene | Cytoband: 3p14.1 | ||
| Entrez ID: 7110 | HGNC ID: HGNC:11870 | Ensembl Gene: ENSG00000144747 | OMIM ID: 601126 |
| Drug and gene relationship at DGIdb | |||
Expression of TMF1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TMF1 | 7110 | 214948_s_at | 1.2408 | 0.0156 | |
| GSE20347 | TMF1 | 7110 | 214948_s_at | 0.7894 | 0.0000 | |
| GSE23400 | TMF1 | 7110 | 214948_s_at | 0.8513 | 0.0000 | |
| GSE26886 | TMF1 | 7110 | 214948_s_at | 0.4632 | 0.0913 | |
| GSE29001 | TMF1 | 7110 | 214948_s_at | 0.7255 | 0.0042 | |
| GSE38129 | TMF1 | 7110 | 214948_s_at | 0.9202 | 0.0000 | |
| GSE45670 | TMF1 | 7110 | 214948_s_at | 0.8230 | 0.0000 | |
| GSE53622 | TMF1 | 7110 | 74625 | -0.9949 | 0.0000 | |
| GSE53624 | TMF1 | 7110 | 74625 | -0.8535 | 0.0000 | |
| GSE63941 | TMF1 | 7110 | 214948_s_at | -0.6858 | 0.2477 | |
| GSE77861 | TMF1 | 7110 | 214948_s_at | 0.8537 | 0.0250 | |
| GSE97050 | TMF1 | 7110 | A_33_P3405531 | -0.3615 | 0.1927 | |
| SRP007169 | TMF1 | 7110 | RNAseq | -1.0430 | 0.0086 | |
| SRP008496 | TMF1 | 7110 | RNAseq | -0.5254 | 0.0443 | |
| SRP064894 | TMF1 | 7110 | RNAseq | -0.8504 | 0.0045 | |
| SRP133303 | TMF1 | 7110 | RNAseq | -0.3353 | 0.0258 | |
| SRP159526 | TMF1 | 7110 | RNAseq | -0.8634 | 0.0009 | |
| SRP193095 | TMF1 | 7110 | RNAseq | -0.7686 | 0.0000 | |
| SRP219564 | TMF1 | 7110 | RNAseq | -0.8108 | 0.0353 | |
| TCGA | TMF1 | 7110 | RNAseq | -0.2863 | 0.0000 |
Upregulated datasets: 1; Downregulated datasets: 1.
Survival by TMF1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of TMF1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TMF1 | 7110 | 1 | 19 | 10 | |
| GSE20123 | TMF1 | 7110 | 1 | 19 | 10 | |
| GSE43470 | TMF1 | 7110 | 0 | 20 | 23 | |
| GSE46452 | TMF1 | 7110 | 2 | 17 | 40 | |
| GSE47630 | TMF1 | 7110 | 1 | 23 | 16 | |
| GSE54993 | TMF1 | 7110 | 5 | 3 | 62 | |
| GSE54994 | TMF1 | 7110 | 1 | 33 | 19 | |
| GSE60625 | TMF1 | 7110 | 3 | 1 | 7 | |
| GSE74703 | TMF1 | 7110 | 0 | 16 | 20 | |
| GSE74704 | TMF1 | 7110 | 1 | 13 | 6 | |
| TCGA | TMF1 | 7110 | 0 | 79 | 17 |
Total number of gains: 15; Total number of losses: 243; Total Number of normals: 230.
Somatic mutations of TMF1:
Generating mutation plots.
Highly correlated genes for TMF1:
Showing top 20/523 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TMF1 | TATDN2 | 0.825921 | 3 | 0 | 3 |
| TMF1 | NUDT5 | 0.781451 | 3 | 0 | 3 |
| TMF1 | KLHL5 | 0.780646 | 3 | 0 | 3 |
| TMF1 | CENPBD1 | 0.779395 | 3 | 0 | 3 |
| TMF1 | CLEC3B | 0.7684 | 3 | 0 | 3 |
| TMF1 | PCDH19 | 0.767707 | 3 | 0 | 3 |
| TMF1 | SPNS1 | 0.763346 | 3 | 0 | 3 |
| TMF1 | CENPV | 0.754049 | 3 | 0 | 3 |
| TMF1 | ZC3HC1 | 0.747068 | 3 | 0 | 3 |
| TMF1 | ZNRF3 | 0.741912 | 3 | 0 | 3 |
| TMF1 | CDCA2 | 0.736582 | 5 | 0 | 5 |
| TMF1 | DSCC1 | 0.730091 | 8 | 0 | 8 |
| TMF1 | TRAF7 | 0.729222 | 3 | 0 | 3 |
| TMF1 | SBNO1 | 0.725388 | 4 | 0 | 4 |
| TMF1 | ZNF32 | 0.724182 | 3 | 0 | 3 |
| TMF1 | UBTD2 | 0.72191 | 3 | 0 | 3 |
| TMF1 | GIMAP5 | 0.71921 | 3 | 0 | 3 |
| TMF1 | CCDC7 | 0.709774 | 4 | 0 | 3 |
| TMF1 | TMTC4 | 0.708165 | 4 | 0 | 4 |
| TMF1 | NUDCD1 | 0.707052 | 5 | 0 | 5 |
For details and further investigation, click here
