TNFSF14

 

Full name: TNF superfamily member 14 Alias Symbol: LIGHT|LTg|HVEM-L|CD258
Type: protein-coding gene Cytoband: 19p13.3
Entrez ID: 8740 HGNC ID: HGNC:11930 Ensembl Gene: ENSG00000125735 OMIM ID: 604520
Drug and gene relationship at DGIdb

 

TNFSF14 involved pathways:

KEGG pathway Description View
hsa04064NF-kappa B signaling pathway

 

Expression of TNFSF14:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 TNFSF14 8740 233935_at -0.1373 0.6652
GSE20347 TNFSF14 8740 207907_at -0.0401 0.7038
GSE23400 TNFSF14 8740 207907_at -0.0974 0.0189
GSE26886 TNFSF14 8740 207907_at 0.0699 0.7772
GSE29001 TNFSF14 8740 207907_at 0.1596 0.4677
GSE38129 TNFSF14 8740 207907_at -0.0961 0.3552
GSE45670 TNFSF14 8740 207907_at 0.0429 0.8755
GSE53622 TNFSF14 8740 38166 0.1275 0.4309
GSE53624 TNFSF14 8740 38166 -0.1132 0.3827
GSE63941 TNFSF14 8740 207907_at -0.1090 0.5919
GSE77861 TNFSF14 8740 207907_at 0.0008 0.9973
GSE97050 TNFSF14 8740 A_24_P237036 0.2296 0.3369
SRP007169 TNFSF14 8740 RNAseq 0.9966 0.2405
SRP064894 TNFSF14 8740 RNAseq 0.5014 0.2145
SRP133303 TNFSF14 8740 RNAseq 0.1499 0.4239
SRP159526 TNFSF14 8740 RNAseq -0.2527 0.5543
SRP193095 TNFSF14 8740 RNAseq 0.0251 0.8298
SRP219564 TNFSF14 8740 RNAseq 0.8274 0.3330
TCGA TNFSF14 8740 RNAseq -0.2895 0.5201

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by TNFSF14 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of TNFSF14:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 TNFSF14 8740 5 3 22
GSE20123 TNFSF14 8740 4 2 24
GSE43470 TNFSF14 8740 2 6 35
GSE46452 TNFSF14 8740 47 1 11
GSE47630 TNFSF14 8740 5 7 28
GSE54993 TNFSF14 8740 16 3 51
GSE54994 TNFSF14 8740 6 14 33
GSE60625 TNFSF14 8740 9 0 2
GSE74703 TNFSF14 8740 2 4 30
GSE74704 TNFSF14 8740 1 2 17
TCGA TNFSF14 8740 9 19 68

Total number of gains: 106; Total number of losses: 61; Total Number of normals: 321.  


 

Somatic mutations of TNFSF14:

 

Generating mutation plots.

 

Highly correlated genes for TNFSF14:

 

Showing top 20/192 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
TNFSF14ANKRD30B0.818962303
TNFSF14UBE2O0.761354303
TNFSF14MSL30.750137303
TNFSF14FAM131B0.732601303
TNFSF14KLHL280.730338303
TNFSF14LIPF0.73011303
TNFSF14PLIN40.722892303
TNFSF14HGS0.722171303
TNFSF14LLPH0.721346303
TNFSF14DMAP10.715834303
TNFSF14XPNPEP10.709107303
TNFSF14CCDC650.705909303
TNFSF14EGLN20.705696303
TNFSF14DHDH0.698002303
TNFSF14AMOTL20.693536303
TNFSF14TAGAP0.690146403
TNFSF14ANKRD440.685814403
TNFSF14C19orf380.682711403
TNFSF14KCNJ20.677903303
TNFSF14XPNPEP30.677606404

For details and further investigation, click here