KCNJ2

 

Full name: potassium inwardly rectifying channel subfamily J member 2 Alias Symbol: Kir2.1|IRK1|LQT7
Type: protein-coding gene Cytoband: 17q24.3
Entrez ID: 3759 HGNC ID: HGNC:6263 Ensembl Gene: ENSG00000123700 OMIM ID: 600681
Drug and gene relationship at DGIdb

 

KCNJ2 involved pathways:

KEGG pathway Description View
hsa04921Oxytocin signaling pathway
hsa04924Renin secretion
hsa04971Gastric acid secretion

 

Expression of KCNJ2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 KCNJ2 3759 206765_at -0.1898 0.9211
GSE20347 KCNJ2 3759 206765_at -0.8630 0.0116
GSE23400 KCNJ2 3759 206765_at -0.0462 0.7293
GSE26886 KCNJ2 3759 206765_at -1.1580 0.0423
GSE29001 KCNJ2 3759 206765_at -1.0276 0.0545
GSE38129 KCNJ2 3759 206765_at -0.5371 0.0927
GSE45670 KCNJ2 3759 206765_at 0.0557 0.8814
GSE53622 KCNJ2 3759 15098 -0.2541 0.1566
GSE53624 KCNJ2 3759 15098 -0.3953 0.0023
GSE63941 KCNJ2 3759 206765_at -4.6616 0.0009
GSE77861 KCNJ2 3759 206765_at -0.3051 0.4747
GSE97050 KCNJ2 3759 A_23_P329261 0.0050 0.9897
SRP007169 KCNJ2 3759 RNAseq 0.4248 0.5283
SRP008496 KCNJ2 3759 RNAseq -0.2492 0.5949
SRP064894 KCNJ2 3759 RNAseq 0.1500 0.5644
SRP133303 KCNJ2 3759 RNAseq 0.0279 0.9298
SRP159526 KCNJ2 3759 RNAseq -0.4727 0.3353
SRP193095 KCNJ2 3759 RNAseq -0.2774 0.3484
SRP219564 KCNJ2 3759 RNAseq -0.4481 0.4113
TCGA KCNJ2 3759 RNAseq 0.1574 0.3540

Upregulated datasets: 0; Downregulated datasets: 2.  


 

Survival by KCNJ2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of KCNJ2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 KCNJ2 3759 3 1 26
GSE20123 KCNJ2 3759 3 1 26
GSE43470 KCNJ2 3759 7 1 35
GSE46452 KCNJ2 3759 32 0 27
GSE47630 KCNJ2 3759 7 1 32
GSE54993 KCNJ2 3759 2 5 63
GSE54994 KCNJ2 3759 9 4 40
GSE60625 KCNJ2 3759 4 3 4
GSE74703 KCNJ2 3759 7 0 29
GSE74704 KCNJ2 3759 3 1 16
TCGA KCNJ2 3759 31 10 55

Total number of gains: 108; Total number of losses: 27; Total Number of normals: 353.  


 

Somatic mutations of KCNJ2:

 

Generating mutation plots.

 

Highly correlated genes for KCNJ2:

 

Showing top 20/283 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
KCNJ2NAGA0.793674303
KCNJ2ANPEP0.763928303
KCNJ2SMC50.746353303
KCNJ2PRRX10.740336303
KCNJ2PDE7B0.732065303
KCNJ2ETS10.728234303
KCNJ2FAM71F20.727973303
KCNJ2ZNF4410.717085303
KCNJ2RARS20.715975404
KCNJ2UNC5C0.71551303
KCNJ2DRAM20.71383303
KCNJ2RHOH0.710629303
KCNJ2FBXL30.708808303
KCNJ2CD590.707728303
KCNJ2B3GNT70.703926303
KCNJ2CXCL50.702784303
KCNJ2TMX40.698891303
KCNJ2ARG20.698737303
KCNJ2DPY19L30.698061303
KCNJ2ELMOD20.696564303

For details and further investigation, click here