AMOTL2

 

Full name: angiomotin like 2 Alias Symbol: LCCP
Type: protein-coding gene Cytoband: 3q22.2
Entrez ID: 51421 HGNC ID: HGNC:17812 Ensembl Gene: ENSG00000114019 OMIM ID: 614658
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of AMOTL2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 AMOTL2 51421 203002_at -0.9524 0.2157
GSE20347 AMOTL2 51421 203002_at -1.3005 0.0000
GSE23400 AMOTL2 51421 203002_at -1.0969 0.0000
GSE26886 AMOTL2 51421 203002_at -1.1808 0.0000
GSE29001 AMOTL2 51421 203002_at -0.7589 0.0072
GSE38129 AMOTL2 51421 203002_at -1.2909 0.0000
GSE45670 AMOTL2 51421 203002_at -0.6997 0.0052
GSE53622 AMOTL2 51421 77748 -1.3261 0.0000
GSE53624 AMOTL2 51421 77748 -1.4530 0.0000
GSE63941 AMOTL2 51421 203002_at -0.7429 0.1714
GSE77861 AMOTL2 51421 203002_at -0.9547 0.0046
GSE97050 AMOTL2 51421 A_23_P166686 -0.7912 0.0849
SRP007169 AMOTL2 51421 RNAseq -2.7035 0.0000
SRP008496 AMOTL2 51421 RNAseq -2.5372 0.0000
SRP064894 AMOTL2 51421 RNAseq -1.8322 0.0000
SRP133303 AMOTL2 51421 RNAseq -1.3949 0.0000
SRP159526 AMOTL2 51421 RNAseq -1.5080 0.0000
SRP193095 AMOTL2 51421 RNAseq -0.8628 0.0001
SRP219564 AMOTL2 51421 RNAseq -0.9872 0.0280
TCGA AMOTL2 51421 RNAseq -0.1298 0.0436

Upregulated datasets: 0; Downregulated datasets: 11.  


 

Survival by AMOTL2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of AMOTL2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 AMOTL2 51421 16 0 14
GSE20123 AMOTL2 51421 16 0 14
GSE43470 AMOTL2 51421 21 0 22
GSE46452 AMOTL2 51421 15 4 40
GSE47630 AMOTL2 51421 18 3 19
GSE54993 AMOTL2 51421 2 8 60
GSE54994 AMOTL2 51421 32 1 20
GSE60625 AMOTL2 51421 0 6 5
GSE74703 AMOTL2 51421 18 0 18
GSE74704 AMOTL2 51421 11 0 9
TCGA AMOTL2 51421 59 5 32

Total number of gains: 208; Total number of losses: 27; Total Number of normals: 253.  


 

Somatic mutations of AMOTL2:

 

Generating mutation plots.

 

Highly correlated genes for AMOTL2:

 

Showing top 20/1220 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
AMOTL2NDUFV20.772223303
AMOTL2TRIP100.75632811011
AMOTL2KIF1C0.7467111011
AMOTL2ERGIC10.746368303
AMOTL2PDLIM20.74339910010
AMOTL2CA130.737799303
AMOTL2KRT780.736824606
AMOTL2KRT33B0.734993303
AMOTL2MTHFR0.731378303
AMOTL2EPS8L10.7307551009
AMOTL2PHYHIPL0.730688303
AMOTL2RAB5B0.73022811011
AMOTL2MAGI30.729058606
AMOTL2MGLL0.72667912012
AMOTL2IQCF10.726147303
AMOTL2ZNF1750.725602303
AMOTL2ANKRD13A0.723503707
AMOTL2CLEC3B0.72091303
AMOTL2SLAIN20.720763504
AMOTL2LACTBL10.720634303

For details and further investigation, click here