| Full name: trafficking protein particle complex 3 | Alias Symbol: BET3 | ||
| Type: protein-coding gene | Cytoband: 1p34.3 | ||
| Entrez ID: 27095 | HGNC ID: HGNC:19942 | Ensembl Gene: ENSG00000054116 | OMIM ID: 610955 |
| Drug and gene relationship at DGIdb | |||
Expression of TRAPPC3:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TRAPPC3 | 27095 | 203512_at | 0.0112 | 0.9844 | |
| GSE20347 | TRAPPC3 | 27095 | 203512_at | -0.1663 | 0.2572 | |
| GSE23400 | TRAPPC3 | 27095 | 203512_at | -0.0201 | 0.7287 | |
| GSE26886 | TRAPPC3 | 27095 | 203512_at | 0.2018 | 0.3492 | |
| GSE29001 | TRAPPC3 | 27095 | 203512_at | -0.0573 | 0.8075 | |
| GSE38129 | TRAPPC3 | 27095 | 203512_at | -0.1572 | 0.1830 | |
| GSE45670 | TRAPPC3 | 27095 | 203511_s_at | 0.1795 | 0.2131 | |
| GSE53622 | TRAPPC3 | 27095 | 22899 | -0.0226 | 0.7124 | |
| GSE53624 | TRAPPC3 | 27095 | 22899 | -0.1580 | 0.0269 | |
| GSE63941 | TRAPPC3 | 27095 | 203511_s_at | 0.6734 | 0.0164 | |
| GSE77861 | TRAPPC3 | 27095 | 203511_s_at | -0.1442 | 0.6636 | |
| GSE97050 | TRAPPC3 | 27095 | A_23_P200535 | -0.1129 | 0.5869 | |
| SRP007169 | TRAPPC3 | 27095 | RNAseq | -0.7338 | 0.0603 | |
| SRP008496 | TRAPPC3 | 27095 | RNAseq | -0.7614 | 0.0008 | |
| SRP064894 | TRAPPC3 | 27095 | RNAseq | 0.0425 | 0.8276 | |
| SRP133303 | TRAPPC3 | 27095 | RNAseq | 0.1475 | 0.3092 | |
| SRP159526 | TRAPPC3 | 27095 | RNAseq | -0.3093 | 0.0876 | |
| SRP193095 | TRAPPC3 | 27095 | RNAseq | -0.3031 | 0.0180 | |
| SRP219564 | TRAPPC3 | 27095 | RNAseq | -0.5867 | 0.0068 | |
| TCGA | TRAPPC3 | 27095 | RNAseq | 0.0723 | 0.1630 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by TRAPPC3 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of TRAPPC3:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TRAPPC3 | 27095 | 3 | 5 | 22 | |
| GSE20123 | TRAPPC3 | 27095 | 3 | 4 | 23 | |
| GSE43470 | TRAPPC3 | 27095 | 7 | 2 | 34 | |
| GSE46452 | TRAPPC3 | 27095 | 4 | 1 | 54 | |
| GSE47630 | TRAPPC3 | 27095 | 8 | 3 | 29 | |
| GSE54993 | TRAPPC3 | 27095 | 1 | 1 | 68 | |
| GSE54994 | TRAPPC3 | 27095 | 11 | 2 | 40 | |
| GSE60625 | TRAPPC3 | 27095 | 0 | 0 | 11 | |
| GSE74703 | TRAPPC3 | 27095 | 6 | 1 | 29 | |
| GSE74704 | TRAPPC3 | 27095 | 2 | 0 | 18 | |
| TCGA | TRAPPC3 | 27095 | 11 | 19 | 66 |
Total number of gains: 56; Total number of losses: 38; Total Number of normals: 394.
Somatic mutations of TRAPPC3:
Generating mutation plots.
Highly correlated genes for TRAPPC3:
Showing top 20/218 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TRAPPC3 | HINT3 | 0.764332 | 3 | 0 | 3 |
| TRAPPC3 | FAM76A | 0.709648 | 3 | 0 | 3 |
| TRAPPC3 | EEF1A2 | 0.700934 | 3 | 0 | 3 |
| TRAPPC3 | TMEM143 | 0.694489 | 3 | 0 | 3 |
| TRAPPC3 | SLC25A3 | 0.693323 | 3 | 0 | 3 |
| TRAPPC3 | ARMC10 | 0.688046 | 3 | 0 | 3 |
| TRAPPC3 | RPP30 | 0.687609 | 4 | 0 | 4 |
| TRAPPC3 | CUL3 | 0.68674 | 3 | 0 | 3 |
| TRAPPC3 | GLUD2 | 0.680887 | 3 | 0 | 3 |
| TRAPPC3 | COPS4 | 0.680225 | 5 | 0 | 5 |
| TRAPPC3 | ARMCX6 | 0.670058 | 3 | 0 | 3 |
| TRAPPC3 | LYRM7 | 0.667129 | 3 | 0 | 3 |
| TRAPPC3 | MED14 | 0.666877 | 4 | 0 | 4 |
| TRAPPC3 | SLC35A3 | 0.665824 | 3 | 0 | 3 |
| TRAPPC3 | B3GALNT1 | 0.665717 | 3 | 0 | 3 |
| TRAPPC3 | NSMCE1 | 0.661426 | 3 | 0 | 3 |
| TRAPPC3 | FBXO36 | 0.657224 | 3 | 0 | 3 |
| TRAPPC3 | ACVR1B | 0.65569 | 3 | 0 | 3 |
| TRAPPC3 | SF3A1 | 0.652594 | 4 | 0 | 3 |
| TRAPPC3 | UBE2N | 0.651916 | 6 | 0 | 6 |
For details and further investigation, click here
