| Full name: vesicle associated membrane protein 5 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 2p11.2 | ||
| Entrez ID: 10791 | HGNC ID: HGNC:12646 | Ensembl Gene: ENSG00000168899 | OMIM ID: 607029 |
| Drug and gene relationship at DGIdb | |||
Expression of VAMP5:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | VAMP5 | 10791 | 204929_s_at | -0.2629 | 0.5311 | |
| GSE20347 | VAMP5 | 10791 | 204929_s_at | -0.3905 | 0.0531 | |
| GSE23400 | VAMP5 | 10791 | 204929_s_at | -0.2015 | 0.0006 | |
| GSE26886 | VAMP5 | 10791 | 204929_s_at | -0.4963 | 0.0603 | |
| GSE29001 | VAMP5 | 10791 | 204929_s_at | -0.2500 | 0.5513 | |
| GSE38129 | VAMP5 | 10791 | 204929_s_at | -0.4761 | 0.0202 | |
| GSE45670 | VAMP5 | 10791 | 204929_s_at | -0.2978 | 0.2413 | |
| GSE53622 | VAMP5 | 10791 | 65579 | -0.1449 | 0.1437 | |
| GSE53624 | VAMP5 | 10791 | 65579 | -0.0865 | 0.3742 | |
| GSE63941 | VAMP5 | 10791 | 204929_s_at | -3.3587 | 0.0005 | |
| GSE77861 | VAMP5 | 10791 | 204929_s_at | -0.3075 | 0.0690 | |
| GSE97050 | VAMP5 | 10791 | A_23_P39840 | 0.3945 | 0.2285 | |
| SRP007169 | VAMP5 | 10791 | RNAseq | -0.3850 | 0.3457 | |
| SRP008496 | VAMP5 | 10791 | RNAseq | -0.4931 | 0.0840 | |
| SRP064894 | VAMP5 | 10791 | RNAseq | -0.4099 | 0.2279 | |
| SRP133303 | VAMP5 | 10791 | RNAseq | 0.1755 | 0.5316 | |
| SRP159526 | VAMP5 | 10791 | RNAseq | -0.5166 | 0.0656 | |
| SRP193095 | VAMP5 | 10791 | RNAseq | -0.4706 | 0.0070 | |
| SRP219564 | VAMP5 | 10791 | RNAseq | 0.1320 | 0.8064 | |
| TCGA | VAMP5 | 10791 | RNAseq | -0.0529 | 0.6585 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by VAMP5 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of VAMP5:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | VAMP5 | 10791 | 9 | 2 | 19 | |
| GSE20123 | VAMP5 | 10791 | 9 | 2 | 19 | |
| GSE43470 | VAMP5 | 10791 | 6 | 2 | 35 | |
| GSE46452 | VAMP5 | 10791 | 2 | 3 | 54 | |
| GSE47630 | VAMP5 | 10791 | 7 | 0 | 33 | |
| GSE54993 | VAMP5 | 10791 | 0 | 6 | 64 | |
| GSE54994 | VAMP5 | 10791 | 10 | 0 | 43 | |
| GSE60625 | VAMP5 | 10791 | 0 | 3 | 8 | |
| GSE74703 | VAMP5 | 10791 | 5 | 1 | 30 | |
| GSE74704 | VAMP5 | 10791 | 7 | 0 | 13 | |
| TCGA | VAMP5 | 10791 | 35 | 3 | 58 |
Total number of gains: 90; Total number of losses: 22; Total Number of normals: 376.
Somatic mutations of VAMP5:
Generating mutation plots.
Highly correlated genes for VAMP5:
Showing top 20/651 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| VAMP5 | SLC35B3 | 0.787541 | 3 | 0 | 3 |
| VAMP5 | PDSS2 | 0.742583 | 3 | 0 | 3 |
| VAMP5 | ZBTB47 | 0.7366 | 3 | 0 | 3 |
| VAMP5 | SSBP1 | 0.730745 | 3 | 0 | 3 |
| VAMP5 | GNGT2 | 0.697961 | 4 | 0 | 4 |
| VAMP5 | UBA7 | 0.697123 | 3 | 0 | 3 |
| VAMP5 | EIF3F | 0.693092 | 3 | 0 | 3 |
| VAMP5 | FAM131B | 0.692309 | 3 | 0 | 3 |
| VAMP5 | ANO10 | 0.690998 | 3 | 0 | 3 |
| VAMP5 | NPRL2 | 0.68994 | 3 | 0 | 3 |
| VAMP5 | C19orf38 | 0.679354 | 3 | 0 | 3 |
| VAMP5 | MYOCD | 0.677393 | 3 | 0 | 3 |
| VAMP5 | ABHD16A | 0.6764 | 4 | 0 | 4 |
| VAMP5 | A2M | 0.670087 | 6 | 0 | 5 |
| VAMP5 | ANTXR2 | 0.668727 | 4 | 0 | 3 |
| VAMP5 | EDNRB | 0.667393 | 6 | 0 | 5 |
| VAMP5 | GIMAP6 | 0.664995 | 9 | 0 | 9 |
| VAMP5 | HSD3B7 | 0.661607 | 3 | 0 | 3 |
| VAMP5 | KCTD6 | 0.661577 | 3 | 0 | 3 |
| VAMP5 | FKBP7 | 0.659366 | 4 | 0 | 3 |
For details and further investigation, click here
