GATAD1

 

Full name: GATA zinc finger domain containing 1 Alias Symbol: ODAG|RG083M05.2|FLJ22489
Type: protein-coding gene Cytoband: 7q21.2
Entrez ID: 57798 HGNC ID: HGNC:29941 Ensembl Gene: ENSG00000157259 OMIM ID: 614518
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of GATAD1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 GATAD1 57798 208503_s_at -0.4794 0.1943
GSE20347 GATAD1 57798 214718_at -0.0173 0.9363
GSE23400 GATAD1 57798 208503_s_at 0.1332 0.0632
GSE26886 GATAD1 57798 214718_at 0.4256 0.2427
GSE29001 GATAD1 57798 213018_at 0.3226 0.1315
GSE38129 GATAD1 57798 214718_at -0.0443 0.8272
GSE45670 GATAD1 57798 208503_s_at -0.0718 0.7480
GSE53622 GATAD1 57798 26092 0.1850 0.0260
GSE53624 GATAD1 57798 99620 0.3854 0.0000
GSE63941 GATAD1 57798 208503_s_at 0.6174 0.2854
GSE77861 GATAD1 57798 208503_s_at 0.4628 0.0820
GSE97050 GATAD1 57798 A_24_P35169 -0.3125 0.2662
SRP007169 GATAD1 57798 RNAseq 0.4628 0.2335
SRP008496 GATAD1 57798 RNAseq 0.6828 0.0209
SRP064894 GATAD1 57798 RNAseq 0.1951 0.1656
SRP133303 GATAD1 57798 RNAseq 0.2595 0.1203
SRP159526 GATAD1 57798 RNAseq -0.0259 0.9038
SRP193095 GATAD1 57798 RNAseq 0.3357 0.0172
SRP219564 GATAD1 57798 RNAseq 0.1758 0.6222
TCGA GATAD1 57798 RNAseq -0.0755 0.2594

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by GATAD1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of GATAD1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 GATAD1 57798 13 0 17
GSE20123 GATAD1 57798 13 0 17
GSE43470 GATAD1 57798 7 1 35
GSE46452 GATAD1 57798 11 0 48
GSE47630 GATAD1 57798 9 2 29
GSE54993 GATAD1 57798 1 9 60
GSE54994 GATAD1 57798 16 2 35
GSE60625 GATAD1 57798 0 0 11
GSE74703 GATAD1 57798 6 1 29
GSE74704 GATAD1 57798 9 0 11
TCGA GATAD1 57798 56 4 36

Total number of gains: 141; Total number of losses: 19; Total Number of normals: 328.  


 

Somatic mutations of GATAD1:

 

Generating mutation plots.

 

Highly correlated genes for GATAD1:

 

Showing top 20/260 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
GATAD1C2orf680.810142303
GATAD1SPOPL0.789957303
GATAD1WHAMM0.78864303
GATAD1SARNP0.7694303
GATAD1CRKL0.755808303
GATAD1SNTB20.751273303
GATAD1FIS10.748024303
GATAD1CCDC1460.740427303
GATAD1RBM330.736164303
GATAD1TBCK0.730824303
GATAD1N4BP2L20.729753303
GATAD1NTN40.729063303
GATAD1ATF10.727485303
GATAD1ZNF3980.722219303
GATAD1C20orf1940.718154303
GATAD1XPNPEP30.713089403
GATAD1IWS10.711601303
GATAD1EIF3F0.711517303
GATAD1SF10.709318303
GATAD1TRMT110.709219303

For details and further investigation, click here