| Full name: tubulin gamma complex associated protein 4 | Alias Symbol: 76P|FLJ14797 | ||
| Type: protein-coding gene | Cytoband: 15q15.3 | ||
| Entrez ID: 27229 | HGNC ID: HGNC:16691 | Ensembl Gene: ENSG00000137822 | OMIM ID: 609610 |
| Drug and gene relationship at DGIdb | |||
Expression of TUBGCP4:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TUBGCP4 | 27229 | 227907_at | -0.0019 | 0.9975 | |
| GSE20347 | TUBGCP4 | 27229 | 211337_s_at | 0.3171 | 0.0920 | |
| GSE23400 | TUBGCP4 | 27229 | 211337_s_at | 0.1953 | 0.0000 | |
| GSE26886 | TUBGCP4 | 27229 | 227907_at | 0.3534 | 0.0800 | |
| GSE29001 | TUBGCP4 | 27229 | 211337_s_at | 0.2926 | 0.3080 | |
| GSE38129 | TUBGCP4 | 27229 | 211337_s_at | 0.4904 | 0.0072 | |
| GSE45670 | TUBGCP4 | 27229 | 211337_s_at | 0.0836 | 0.6670 | |
| GSE53622 | TUBGCP4 | 27229 | 50585 | 0.0812 | 0.2797 | |
| GSE53624 | TUBGCP4 | 27229 | 50585 | 0.1151 | 0.1645 | |
| GSE63941 | TUBGCP4 | 27229 | 211337_s_at | 1.5141 | 0.0015 | |
| GSE77861 | TUBGCP4 | 27229 | 227907_at | 0.0290 | 0.9267 | |
| GSE97050 | TUBGCP4 | 27229 | A_23_P3450 | 0.0182 | 0.9515 | |
| SRP007169 | TUBGCP4 | 27229 | RNAseq | 0.2424 | 0.5947 | |
| SRP008496 | TUBGCP4 | 27229 | RNAseq | 0.1380 | 0.6617 | |
| SRP064894 | TUBGCP4 | 27229 | RNAseq | 0.1031 | 0.3868 | |
| SRP133303 | TUBGCP4 | 27229 | RNAseq | 0.2542 | 0.1579 | |
| SRP159526 | TUBGCP4 | 27229 | RNAseq | 0.0875 | 0.7105 | |
| SRP193095 | TUBGCP4 | 27229 | RNAseq | 0.1684 | 0.0728 | |
| SRP219564 | TUBGCP4 | 27229 | RNAseq | -0.0228 | 0.9320 | |
| TCGA | TUBGCP4 | 27229 | RNAseq | 0.0816 | 0.1528 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by TUBGCP4 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of TUBGCP4:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TUBGCP4 | 27229 | 4 | 4 | 22 | |
| GSE20123 | TUBGCP4 | 27229 | 4 | 5 | 21 | |
| GSE43470 | TUBGCP4 | 27229 | 3 | 5 | 35 | |
| GSE46452 | TUBGCP4 | 27229 | 3 | 7 | 49 | |
| GSE47630 | TUBGCP4 | 27229 | 8 | 10 | 22 | |
| GSE54993 | TUBGCP4 | 27229 | 4 | 6 | 60 | |
| GSE54994 | TUBGCP4 | 27229 | 5 | 7 | 41 | |
| GSE60625 | TUBGCP4 | 27229 | 4 | 0 | 7 | |
| GSE74703 | TUBGCP4 | 27229 | 3 | 3 | 30 | |
| GSE74704 | TUBGCP4 | 27229 | 3 | 2 | 15 | |
| TCGA | TUBGCP4 | 27229 | 12 | 17 | 67 |
Total number of gains: 53; Total number of losses: 66; Total Number of normals: 369.
Somatic mutations of TUBGCP4:
Generating mutation plots.
Highly correlated genes for TUBGCP4:
Showing top 20/659 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TUBGCP4 | RPS19BP1 | 0.805452 | 3 | 0 | 3 |
| TUBGCP4 | MRPL38 | 0.799578 | 3 | 0 | 3 |
| TUBGCP4 | GABRA3 | 0.773856 | 3 | 0 | 3 |
| TUBGCP4 | C10orf88 | 0.770112 | 4 | 0 | 4 |
| TUBGCP4 | ARIH1 | 0.766059 | 3 | 0 | 3 |
| TUBGCP4 | WHAMM | 0.762682 | 3 | 0 | 3 |
| TUBGCP4 | SYNGR2 | 0.753131 | 3 | 0 | 3 |
| TUBGCP4 | LOXL4 | 0.742036 | 3 | 0 | 3 |
| TUBGCP4 | TBK1 | 0.734123 | 3 | 0 | 3 |
| TUBGCP4 | RNF26 | 0.732154 | 3 | 0 | 3 |
| TUBGCP4 | LYSMD1 | 0.732144 | 3 | 0 | 3 |
| TUBGCP4 | PARG | 0.731736 | 3 | 0 | 3 |
| TUBGCP4 | RRNAD1 | 0.73033 | 3 | 0 | 3 |
| TUBGCP4 | ZCCHC8 | 0.726879 | 3 | 0 | 3 |
| TUBGCP4 | MRPS11 | 0.724285 | 4 | 0 | 3 |
| TUBGCP4 | MPV17L | 0.717801 | 3 | 0 | 3 |
| TUBGCP4 | NIP7 | 0.713874 | 4 | 0 | 4 |
| TUBGCP4 | NCOR1 | 0.71255 | 3 | 0 | 3 |
| TUBGCP4 | TCTEX1D2 | 0.710729 | 4 | 0 | 3 |
| TUBGCP4 | FAN1 | 0.708495 | 4 | 0 | 3 |
For details and further investigation, click here
