ZC3H7A

 

Full name: zinc finger CCCH-type containing 7A Alias Symbol: HSPC055|FLJ20318
Type: protein-coding gene Cytoband: 16p13.13
Entrez ID: 29066 HGNC ID: HGNC:30959 Ensembl Gene: ENSG00000122299 OMIM ID: 
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of ZC3H7A:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ZC3H7A 29066 218348_s_at -0.0475 0.9307
GSE20347 ZC3H7A 29066 218348_s_at 0.5894 0.0001
GSE23400 ZC3H7A 29066 218348_s_at 0.4556 0.0000
GSE26886 ZC3H7A 29066 218348_s_at -0.0166 0.9618
GSE29001 ZC3H7A 29066 218348_s_at 0.6913 0.0078
GSE38129 ZC3H7A 29066 218348_s_at 0.3704 0.0520
GSE45670 ZC3H7A 29066 218348_s_at 0.0606 0.6824
GSE53622 ZC3H7A 29066 37674 0.1703 0.0196
GSE53624 ZC3H7A 29066 37674 0.3485 0.0000
GSE63941 ZC3H7A 29066 218348_s_at -1.3492 0.0005
GSE77861 ZC3H7A 29066 218348_s_at 0.1866 0.2112
GSE97050 ZC3H7A 29066 A_23_P26336 -0.0972 0.7449
SRP007169 ZC3H7A 29066 RNAseq 1.2194 0.0045
SRP008496 ZC3H7A 29066 RNAseq 1.5892 0.0000
SRP064894 ZC3H7A 29066 RNAseq 0.1000 0.6760
SRP133303 ZC3H7A 29066 RNAseq 0.5061 0.0000
SRP159526 ZC3H7A 29066 RNAseq 0.0954 0.5552
SRP193095 ZC3H7A 29066 RNAseq 0.2982 0.0146
SRP219564 ZC3H7A 29066 RNAseq 0.1899 0.5586
TCGA ZC3H7A 29066 RNAseq -0.1011 0.0338

Upregulated datasets: 2; Downregulated datasets: 1.  


 

Survival by ZC3H7A expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ZC3H7A:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ZC3H7A 29066 4 4 22
GSE20123 ZC3H7A 29066 4 3 23
GSE43470 ZC3H7A 29066 3 3 37
GSE46452 ZC3H7A 29066 38 1 20
GSE47630 ZC3H7A 29066 14 6 20
GSE54993 ZC3H7A 29066 3 5 62
GSE54994 ZC3H7A 29066 5 9 39
GSE60625 ZC3H7A 29066 4 0 7
GSE74703 ZC3H7A 29066 3 2 31
GSE74704 ZC3H7A 29066 2 1 17
TCGA ZC3H7A 29066 21 12 63

Total number of gains: 101; Total number of losses: 46; Total Number of normals: 341.  


 

Somatic mutations of ZC3H7A:

 

Generating mutation plots.

 

Highly correlated genes for ZC3H7A:

 

Showing top 20/334 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ZC3H7AC20orf1940.716983303
ZC3H7ARAB290.664191808
ZC3H7ALAMC10.646228908
ZC3H7AKIAA11090.640554303
ZC3H7ACOL4A10.639641907
ZC3H7ADDR20.629246403
ZC3H7ATMEM2630.628044605
ZC3H7ALAMA20.627799504
ZC3H7AEVC0.627476503
ZC3H7AIGIP0.62641303
ZC3H7ACTSL0.626152808
ZC3H7APDGFRL0.625175807
ZC3H7ADOCK110.624828303
ZC3H7AMORN40.624679303
ZC3H7ATXNDC150.621997505
ZC3H7AFSTL10.6207761009
ZC3H7AZKSCAN20.617777303
ZC3H7ANID10.616604806
ZC3H7AAPOBEC3B0.615931303
ZC3H7AMMD0.6119751008

For details and further investigation, click here