ZMAT3

 

Full name: zinc finger matrin-type 3 Alias Symbol: WIG1|MGC10613|FLJ12296|WIG-1|PAG608
Type: protein-coding gene Cytoband: 3q26.32
Entrez ID: 64393 HGNC ID: HGNC:29983 Ensembl Gene: ENSG00000172667 OMIM ID: 606452
Drug and gene relationship at DGIdb

 

ZMAT3 involved pathways:

KEGG pathway Description View
hsa04115p53 signaling pathway

 

Expression of ZMAT3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ZMAT3 64393 228315_at -0.0222 0.9779
GSE20347 ZMAT3 64393 219628_at -0.0209 0.9150
GSE23400 ZMAT3 64393 219628_at -0.0053 0.9380
GSE26886 ZMAT3 64393 225725_at -0.3523 0.2047
GSE29001 ZMAT3 64393 219628_at -0.2099 0.4811
GSE38129 ZMAT3 64393 219628_at -0.0670 0.6847
GSE45670 ZMAT3 64393 228315_at 0.0795 0.7392
GSE63941 ZMAT3 64393 225725_at -3.6854 0.0000
GSE77861 ZMAT3 64393 225725_at -0.0703 0.7540
GSE97050 ZMAT3 64393 A_23_P113283 0.3632 0.2501
SRP007169 ZMAT3 64393 RNAseq 1.5617 0.0172
SRP008496 ZMAT3 64393 RNAseq 1.5770 0.0000
SRP064894 ZMAT3 64393 RNAseq 0.5430 0.0037
SRP133303 ZMAT3 64393 RNAseq 0.4662 0.0009
SRP159526 ZMAT3 64393 RNAseq 1.0299 0.0079
SRP193095 ZMAT3 64393 RNAseq 0.0748 0.5132
SRP219564 ZMAT3 64393 RNAseq -0.0485 0.9252
TCGA ZMAT3 64393 RNAseq -0.0547 0.4896

Upregulated datasets: 3; Downregulated datasets: 1.  


 

Survival by ZMAT3 expression:

 

TCGA

 

Note: Click image to view full size file.  


Copy number change of ZMAT3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ZMAT3 64393 25 0 5
GSE20123 ZMAT3 64393 25 0 5
GSE43470 ZMAT3 64393 24 0 19
GSE46452 ZMAT3 64393 19 1 39
GSE47630 ZMAT3 64393 27 2 11
GSE54993 ZMAT3 64393 1 18 51
GSE54994 ZMAT3 64393 41 0 12
GSE60625 ZMAT3 64393 0 6 5
GSE74703 ZMAT3 64393 20 0 16
GSE74704 ZMAT3 64393 16 0 4
TCGA ZMAT3 64393 78 0 18

Total number of gains: 276; Total number of losses: 27; Total Number of normals: 185.  


 

Somatic mutations of ZMAT3:

 

Generating mutation plots.

 

Highly correlated genes for ZMAT3:

 

Showing top 20/272 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ZMAT3ANKRD440.802712404
ZMAT3TMOD20.797025303
ZMAT3ZNF5700.777751303
ZMAT3RRM2B0.772108303
ZMAT3KBTBD60.770144303
ZMAT3TRIM80.768475303
ZMAT3PNPLA80.767182303
ZMAT3ZNF250.765319303
ZMAT3ZMPSTE240.762924303
ZMAT3SNX180.753257303
ZMAT3NTAN10.750027303
ZMAT3KBTBD70.7492303
ZMAT3FKBP70.743802303
ZMAT3EZH10.741678303
ZMAT3CHUK0.741068303
ZMAT3VPS26B0.735912303
ZMAT3ZNF5830.735054303
ZMAT3ZNF3220.731764303
ZMAT3IMPAD10.730169303
ZMAT3FBXW20.728112303

For details and further investigation, click here