ZNF496

 

Full name: zinc finger protein 496 Alias Symbol: ZKSCAN17|MGC15548|ZSCAN49
Type: protein-coding gene Cytoband: 1q44
Entrez ID: 84838 HGNC ID: HGNC:23713 Ensembl Gene: ENSG00000162714 OMIM ID: 613911
Drug and gene relationship at DGIdb

 

Expression of ZNF496:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ZNF496 84838 225335_at 0.7614 0.1129
GSE26886 ZNF496 84838 225335_at 1.5858 0.0000
GSE45670 ZNF496 84838 225335_at 0.1032 0.6311
GSE53622 ZNF496 84838 73144 0.7356 0.0000
GSE53624 ZNF496 84838 73144 0.8721 0.0000
GSE63941 ZNF496 84838 225335_at 0.1374 0.7473
GSE77861 ZNF496 84838 225335_at 0.4526 0.0350
GSE97050 ZNF496 84838 A_33_P3400244 0.1909 0.5133
SRP007169 ZNF496 84838 RNAseq 1.4087 0.0022
SRP008496 ZNF496 84838 RNAseq 1.7624 0.0000
SRP064894 ZNF496 84838 RNAseq 0.6987 0.0000
SRP133303 ZNF496 84838 RNAseq 0.2586 0.0567
SRP159526 ZNF496 84838 RNAseq 0.9541 0.0007
SRP193095 ZNF496 84838 RNAseq 0.9640 0.0000
SRP219564 ZNF496 84838 RNAseq 0.6239 0.0278
TCGA ZNF496 84838 RNAseq -0.0333 0.6427

Upregulated datasets: 3; Downregulated datasets: 0.  


 

Survival by ZNF496 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ZNF496:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ZNF496 84838 7 1 22
GSE20123 ZNF496 84838 7 1 22
GSE43470 ZNF496 84838 4 3 36
GSE46452 ZNF496 84838 4 2 53
GSE47630 ZNF496 84838 15 1 24
GSE54993 ZNF496 84838 0 6 64
GSE54994 ZNF496 84838 18 0 35
GSE60625 ZNF496 84838 0 0 11
GSE74703 ZNF496 84838 4 1 31
GSE74704 ZNF496 84838 2 0 18
TCGA ZNF496 84838 45 4 47

Total number of gains: 106; Total number of losses: 19; Total Number of normals: 363.  


 

Somatic mutations of ZNF496:

 

Generating mutation plots.

 

Highly correlated genes for ZNF496:

 

Showing top 20/1383 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ZNF496SSBP40.820535505
ZNF496ING10.819571303
ZNF496POLR2K0.800886303
ZNF496MYNN0.794921303
ZNF496PDCD2L0.794708404
ZNF496SLC25A380.793169303
ZNF496TMEM63B0.792261303
ZNF496ZNF3170.788182303
ZNF496TCTN10.786233303
ZNF496TFDP20.784989303
ZNF496ECSIT0.784292303
ZNF496IL13RA20.780111303
ZNF496QTRT10.778812303
ZNF496CERS20.778529505
ZNF496BMPR1A0.777754303
ZNF496FYN0.774068303
ZNF496KLHL360.773706303
ZNF496TMEM161A0.771648404
ZNF496TSPAN150.769868303
ZNF496CTPS20.769614303

For details and further investigation, click here