ZNF684

 

Full name: zinc finger protein 684 Alias Symbol: MGC27466
Type: protein-coding gene Cytoband: 1p34.2
Entrez ID: 127396 HGNC ID: HGNC:28418 Ensembl Gene: ENSG00000117010 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of ZNF684:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ZNF684 127396 232563_at 0.1546 0.8540
GSE26886 ZNF684 127396 244398_x_at 0.2273 0.1786
GSE45670 ZNF684 127396 244398_x_at 0.0832 0.4978
GSE53622 ZNF684 127396 93305 0.1135 0.1053
GSE53624 ZNF684 127396 93305 0.2873 0.0000
GSE63941 ZNF684 127396 232563_at 0.1468 0.7918
GSE77861 ZNF684 127396 244398_x_at -0.0482 0.6798
GSE97050 ZNF684 127396 A_33_P3211054 -0.0045 0.9848
SRP007169 ZNF684 127396 RNAseq 0.5382 0.4112
SRP064894 ZNF684 127396 RNAseq 0.3355 0.0754
SRP133303 ZNF684 127396 RNAseq 0.5704 0.0013
SRP159526 ZNF684 127396 RNAseq 0.7268 0.2188
SRP193095 ZNF684 127396 RNAseq 0.2737 0.0769
SRP219564 ZNF684 127396 RNAseq 0.5026 0.2794
TCGA ZNF684 127396 RNAseq -0.3427 0.0057

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by ZNF684 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ZNF684:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ZNF684 127396 3 4 23
GSE20123 ZNF684 127396 2 3 25
GSE43470 ZNF684 127396 7 2 34
GSE46452 ZNF684 127396 4 1 54
GSE47630 ZNF684 127396 9 2 29
GSE54993 ZNF684 127396 0 1 69
GSE54994 ZNF684 127396 13 2 38
GSE60625 ZNF684 127396 0 0 11
GSE74703 ZNF684 127396 6 1 29
GSE74704 ZNF684 127396 1 0 19
TCGA ZNF684 127396 16 16 64

Total number of gains: 61; Total number of losses: 32; Total Number of normals: 395.  


 

Somatic mutations of ZNF684:

 

Generating mutation plots.

 

Highly correlated genes for ZNF684:

 

Showing top 20/36 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ZNF684CLEC12B0.77735303
ZNF684FSIP10.70435303
ZNF684SUDS30.699539303
ZNF684MAGEB20.691232303
ZNF684NUBP10.651044303
ZNF684SF3A30.646574403
ZNF684EXO50.618953403
ZNF684PLCL20.614266303
ZNF684ZFP690.599572503
ZNF684MID10.593966403
ZNF684POC1A0.589863504
ZNF684PXN-AS10.589645303
ZNF684ZNF5110.588255403
ZNF684DCTPP10.578658303
ZNF684POLE40.578063503
ZNF684ZNF3110.574584303
ZNF684LENG10.574409403
ZNF684NDC10.571595503
ZNF684TMEM39B0.567087403
ZNF684CDC200.565794503

For details and further investigation, click here