ZSCAN9

 

Full name: zinc finger and SCAN domain containing 9 Alias Symbol: PRD51
Type: protein-coding gene Cytoband: 6p22.1
Entrez ID: 7746 HGNC ID: HGNC:12984 Ensembl Gene: ENSG00000137185 OMIM ID: 602246
Drug and gene relationship at DGIdb

 

Expression of ZSCAN9:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ZSCAN9 7746 205181_at -0.0115 0.9888
GSE20347 ZSCAN9 7746 205181_at 0.1319 0.2031
GSE23400 ZSCAN9 7746 205181_at 0.0172 0.6764
GSE26886 ZSCAN9 7746 205181_at 0.2535 0.1539
GSE29001 ZSCAN9 7746 205181_at 0.1539 0.5441
GSE38129 ZSCAN9 7746 205181_at 0.0336 0.7509
GSE45670 ZSCAN9 7746 205181_at -0.0838 0.6663
GSE53622 ZSCAN9 7746 70863 0.1037 0.1601
GSE53624 ZSCAN9 7746 70863 0.1598 0.0050
GSE63941 ZSCAN9 7746 239406_at -0.0418 0.9452
GSE77861 ZSCAN9 7746 205181_at -0.0533 0.7331
SRP064894 ZSCAN9 7746 RNAseq 0.3976 0.0060
SRP133303 ZSCAN9 7746 RNAseq -0.0829 0.5897
SRP159526 ZSCAN9 7746 RNAseq 0.1673 0.6789
SRP193095 ZSCAN9 7746 RNAseq -0.1716 0.2426
SRP219564 ZSCAN9 7746 RNAseq 0.5082 0.1355

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by ZSCAN9 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  


Copy number change of ZSCAN9:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ZSCAN9 7746 3 2 25
GSE20123 ZSCAN9 7746 3 2 25
GSE43470 ZSCAN9 7746 5 0 38
GSE46452 ZSCAN9 7746 1 10 48
GSE47630 ZSCAN9 7746 7 4 29
GSE54993 ZSCAN9 7746 2 1 67
GSE54994 ZSCAN9 7746 11 4 38
GSE60625 ZSCAN9 7746 0 1 10
GSE74703 ZSCAN9 7746 5 0 31
GSE74704 ZSCAN9 7746 0 1 19
TCGA ZSCAN9 7746 15 19 62

Total number of gains: 52; Total number of losses: 44; Total Number of normals: 392.  


 

Somatic mutations of ZSCAN9:

 

Generating mutation plots.

 

Highly correlated genes for ZSCAN9:

 

Showing top 20/23 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ZSCAN9RXRB0.725107303
ZSCAN9ZNF1480.660988303
ZSCAN9ZNF8050.628129403
ZSCAN9C2orf760.614106303
ZSCAN9ZKSCAN80.598109605
ZSCAN9EPC10.594496303
ZSCAN9ZNF320.592179403
ZSCAN9SEC630.587971303
ZSCAN9ATAT10.576363403
ZSCAN9VPS80.56798303
ZSCAN9ZSCAN120.56517706
ZSCAN9POGLUT10.56078604
ZSCAN9ZSCAN260.556412905
ZSCAN9RING10.555504403
ZSCAN9HNRNPH30.544178504
ZSCAN9ARMC80.538707403
ZSCAN9RPGRIP1L0.538212403
ZSCAN9BTN2A10.525931703
ZSCAN9ZNF2390.519935604
ZSCAN9POLR3C0.518761604

For details and further investigation, click here