ADAMTS19

 

Full name: ADAM metallopeptidase with thrombospondin type 1 motif 19 Alias Symbol: 
Type: protein-coding gene Cytoband: 5q23.3
Entrez ID: 171019 HGNC ID: HGNC:17111 Ensembl Gene: ENSG00000145808 OMIM ID: 607513
Drug and gene relationship at DGIdb

 

Expression of ADAMTS19:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ADAMTS19 171019 1553179_at -0.4740 0.6191
GSE26886 ADAMTS19 171019 1553179_at 0.0677 0.5446
GSE45670 ADAMTS19 171019 1553179_at -0.0446 0.7114
GSE53622 ADAMTS19 171019 23327 -0.1746 0.2477
GSE53624 ADAMTS19 171019 23327 -0.4097 0.0004
GSE63941 ADAMTS19 171019 1553179_at -1.6891 0.0000
GSE77861 ADAMTS19 171019 1553179_at -0.1470 0.1267
GSE97050 ADAMTS19 171019 A_33_P3317392 -0.4625 0.2743
SRP133303 ADAMTS19 171019 RNAseq -0.4092 0.6984
TCGA ADAMTS19 171019 RNAseq -0.8572 0.4164

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by ADAMTS19 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ADAMTS19:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ADAMTS19 171019 1 12 17
GSE20123 ADAMTS19 171019 1 12 17
GSE43470 ADAMTS19 171019 3 8 32
GSE46452 ADAMTS19 171019 0 27 32
GSE47630 ADAMTS19 171019 0 21 19
GSE54993 ADAMTS19 171019 9 1 60
GSE54994 ADAMTS19 171019 2 14 37
GSE60625 ADAMTS19 171019 0 0 11
GSE74703 ADAMTS19 171019 2 6 28
GSE74704 ADAMTS19 171019 1 6 13
TCGA ADAMTS19 171019 2 41 53

Total number of gains: 21; Total number of losses: 148; Total Number of normals: 319.  


 

Somatic mutations of ADAMTS19:

 

Generating mutation plots.

 

Highly correlated genes for ADAMTS19:

 

Showing top 20/175 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ADAMTS19NPR20.800375303
ADAMTS19ZNF7810.793758303
ADAMTS19NME50.726295303
ADAMTS19DENND2A0.723351403
ADAMTS19ABLIM30.718762303
ADAMTS19AFF30.715977303
ADAMTS19WNT5B0.714791303
ADAMTS19IL17B0.71422303
ADAMTS19GRIK30.702855303
ADAMTS19NPTX10.701253303
ADAMTS19NLGN10.699172303
ADAMTS19ZNF5820.694346303
ADAMTS19TCEAL70.693392404
ADAMTS19SMIM100.687641303
ADAMTS19CACNA1C0.684113303
ADAMTS19CTIF0.683734404
ADAMTS19GNG80.68089303
ADAMTS19JAZF1-AS10.680146403
ADAMTS19GDNF0.678194503
ADAMTS19LAMA40.672336303

For details and further investigation, click here