| Full name: adhesion molecule with Ig like domain 1 | Alias Symbol: AMIGO|KIAA1163 | ||
| Type: protein-coding gene | Cytoband: 1p13.3 | ||
| Entrez ID: 57463 | HGNC ID: HGNC:20824 | Ensembl Gene: ENSG00000181754 | OMIM ID: 615689 |
| Drug and gene relationship at DGIdb | |||
Expression of AMIGO1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | AMIGO1 | 57463 | 226718_at | 0.0348 | 0.9661 | |
| GSE26886 | AMIGO1 | 57463 | 226718_at | 0.4306 | 0.0477 | |
| GSE45670 | AMIGO1 | 57463 | 226718_at | -0.2009 | 0.1772 | |
| GSE53622 | AMIGO1 | 57463 | 49363 | -0.8370 | 0.0000 | |
| GSE53624 | AMIGO1 | 57463 | 49363 | -0.3582 | 0.0020 | |
| GSE63941 | AMIGO1 | 57463 | 226718_at | -0.6062 | 0.3242 | |
| GSE77861 | AMIGO1 | 57463 | 226718_at | 0.0263 | 0.8713 | |
| GSE97050 | AMIGO1 | 57463 | A_33_P3369461 | -0.3642 | 0.2733 | |
| SRP007169 | AMIGO1 | 57463 | RNAseq | 0.9863 | 0.1180 | |
| SRP064894 | AMIGO1 | 57463 | RNAseq | -0.3286 | 0.2373 | |
| SRP133303 | AMIGO1 | 57463 | RNAseq | -0.7834 | 0.0741 | |
| SRP159526 | AMIGO1 | 57463 | RNAseq | 0.6279 | 0.1623 | |
| SRP193095 | AMIGO1 | 57463 | RNAseq | -0.2810 | 0.2598 | |
| SRP219564 | AMIGO1 | 57463 | RNAseq | -0.3486 | 0.6823 | |
| TCGA | AMIGO1 | 57463 | RNAseq | -0.5735 | 0.0048 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by AMIGO1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of AMIGO1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | AMIGO1 | 57463 | 0 | 12 | 18 | |
| GSE20123 | AMIGO1 | 57463 | 0 | 11 | 19 | |
| GSE43470 | AMIGO1 | 57463 | 0 | 8 | 35 | |
| GSE46452 | AMIGO1 | 57463 | 2 | 1 | 56 | |
| GSE47630 | AMIGO1 | 57463 | 9 | 5 | 26 | |
| GSE54993 | AMIGO1 | 57463 | 0 | 1 | 69 | |
| GSE54994 | AMIGO1 | 57463 | 7 | 4 | 42 | |
| GSE60625 | AMIGO1 | 57463 | 0 | 0 | 11 | |
| GSE74703 | AMIGO1 | 57463 | 0 | 6 | 30 | |
| GSE74704 | AMIGO1 | 57463 | 0 | 7 | 13 | |
| TCGA | AMIGO1 | 57463 | 8 | 26 | 62 |
Total number of gains: 26; Total number of losses: 81; Total Number of normals: 381.
Somatic mutations of AMIGO1:
Generating mutation plots.
Highly correlated genes for AMIGO1:
Showing top 20/398 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| AMIGO1 | TTC33 | 0.805134 | 3 | 0 | 3 |
| AMIGO1 | ANKS1A | 0.747401 | 3 | 0 | 3 |
| AMIGO1 | FAM117A | 0.746626 | 3 | 0 | 3 |
| AMIGO1 | SLC2A4 | 0.740879 | 3 | 0 | 3 |
| AMIGO1 | ANGPTL7 | 0.730692 | 3 | 0 | 3 |
| AMIGO1 | ARL3 | 0.727608 | 3 | 0 | 3 |
| AMIGO1 | ZNF470 | 0.721512 | 3 | 0 | 3 |
| AMIGO1 | CTXN1 | 0.710048 | 3 | 0 | 3 |
| AMIGO1 | NRXN3 | 0.708036 | 4 | 0 | 3 |
| AMIGO1 | MXRA7 | 0.69891 | 3 | 0 | 3 |
| AMIGO1 | DZIP3 | 0.692243 | 3 | 0 | 3 |
| AMIGO1 | UBE4B | 0.684953 | 3 | 0 | 3 |
| AMIGO1 | COX7A1 | 0.68055 | 3 | 0 | 3 |
| AMIGO1 | FNDC5 | 0.676308 | 4 | 0 | 3 |
| AMIGO1 | OSCP1 | 0.673861 | 3 | 0 | 3 |
| AMIGO1 | PPP1R9A | 0.671232 | 4 | 0 | 3 |
| AMIGO1 | ANKRD40 | 0.66918 | 3 | 0 | 3 |
| AMIGO1 | COA5 | 0.668807 | 4 | 0 | 3 |
| AMIGO1 | RGS9 | 0.668457 | 3 | 0 | 3 |
| AMIGO1 | KIAA1257 | 0.667419 | 3 | 0 | 3 |
For details and further investigation, click here
