C11orf71

 

Full name: chromosome 11 open reading frame 71 Alias Symbol: FLJ20010
Type: protein-coding gene Cytoband: 11q23.2
Entrez ID: 54494 HGNC ID: HGNC:25937 Ensembl Gene: ENSG00000180425 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of C11orf71:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 C11orf71 54494 222743_s_at -0.2850 0.5470
GSE20347 C11orf71 54494 218789_s_at 0.1976 0.1373
GSE23400 C11orf71 54494 218789_s_at 0.0765 0.2879
GSE26886 C11orf71 54494 222743_s_at 0.5387 0.0107
GSE29001 C11orf71 54494 218789_s_at 0.0609 0.8920
GSE38129 C11orf71 54494 218789_s_at -0.0438 0.8189
GSE45670 C11orf71 54494 218789_s_at -0.0424 0.9112
GSE53622 C11orf71 54494 66741 -0.0872 0.3423
GSE53624 C11orf71 54494 66741 -0.2104 0.0105
GSE63941 C11orf71 54494 222743_s_at 0.5722 0.1657
GSE77861 C11orf71 54494 222743_s_at 0.1311 0.3828
GSE97050 C11orf71 54494 A_24_P210082 -0.5312 0.2653
SRP007169 C11orf71 54494 RNAseq -1.0935 0.0332
SRP008496 C11orf71 54494 RNAseq -0.6571 0.0847
SRP064894 C11orf71 54494 RNAseq -0.5019 0.0251
SRP133303 C11orf71 54494 RNAseq -0.2814 0.2471
SRP159526 C11orf71 54494 RNAseq 0.5344 0.1250
SRP193095 C11orf71 54494 RNAseq -0.5566 0.0001
SRP219564 C11orf71 54494 RNAseq -0.4030 0.3083
TCGA C11orf71 54494 RNAseq -0.1044 0.3704

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by C11orf71 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of C11orf71:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 C11orf71 54494 0 13 17
GSE20123 C11orf71 54494 0 13 17
GSE43470 C11orf71 54494 2 7 34
GSE46452 C11orf71 54494 3 26 30
GSE47630 C11orf71 54494 2 19 19
GSE54993 C11orf71 54494 10 0 60
GSE54994 C11orf71 54494 5 19 29
GSE60625 C11orf71 54494 0 3 8
GSE74703 C11orf71 54494 1 5 30
GSE74704 C11orf71 54494 0 9 11
TCGA C11orf71 54494 6 49 41

Total number of gains: 29; Total number of losses: 163; Total Number of normals: 296.  


 

Somatic mutations of C11orf71:

 

Generating mutation plots.

 

Highly correlated genes for C11orf71:

 

Showing top 20/137 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
C11orf71DACT20.720171303
C11orf71AFMID0.714052303
C11orf71S1PR30.712922303
C11orf71SRSF120.697183303
C11orf71DAG10.696314303
C11orf71SMOC20.688848303
C11orf71CYHR10.686062303
C11orf71FGF30.679125303
C11orf71CHN20.674728303
C11orf71C12orf570.668151404
C11orf71DPF20.664322303
C11orf71PCBP30.659568303
C11orf71GRPR0.655751303
C11orf71FAM167B0.650397303
C11orf71NELL10.643929303
C11orf71UNC5A0.641551303
C11orf71SURF10.641234303
C11orf71EID10.639462403
C11orf71BEND50.637518403
C11orf71NEO10.634644403

For details and further investigation, click here