NELL1

 

Full name: neural EGFL like 1 Alias Symbol: IDH3GL|FLJ45906
Type: protein-coding gene Cytoband: 11p15.1
Entrez ID: 4745 HGNC ID: HGNC:7750 Ensembl Gene: ENSG00000165973 OMIM ID: 602319
Drug and gene relationship at DGIdb

 

Expression of NELL1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 NELL1 4745 206089_at -0.0626 0.9231
GSE20347 NELL1 4745 206089_at -0.0251 0.8675
GSE23400 NELL1 4745 206089_at -0.1329 0.0708
GSE26886 NELL1 4745 206089_at -0.0526 0.8113
GSE29001 NELL1 4745 206089_at -0.0377 0.8922
GSE38129 NELL1 4745 206089_at -0.0358 0.9091
GSE45670 NELL1 4745 206089_at -0.0946 0.6770
GSE53622 NELL1 4745 31928 -0.5676 0.0172
GSE53624 NELL1 4745 31928 -0.4189 0.0514
GSE63941 NELL1 4745 206089_at 0.1512 0.2476
GSE77861 NELL1 4745 206089_at 0.0372 0.8583
GSE97050 NELL1 4745 A_33_P3354203 -0.0760 0.7519
TCGA NELL1 4745 RNAseq -0.8855 0.3253

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by NELL1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of NELL1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 NELL1 4745 0 11 19
GSE20123 NELL1 4745 0 11 19
GSE43470 NELL1 4745 1 6 36
GSE46452 NELL1 4745 7 5 47
GSE47630 NELL1 4745 3 10 27
GSE54993 NELL1 4745 3 0 67
GSE54994 NELL1 4745 4 11 38
GSE60625 NELL1 4745 0 0 11
GSE74703 NELL1 4745 1 4 31
GSE74704 NELL1 4745 0 9 11
TCGA NELL1 4745 13 26 57

Total number of gains: 32; Total number of losses: 93; Total Number of normals: 363.  


 

Somatic mutations of NELL1:

 

Generating mutation plots.

 

Highly correlated genes for NELL1:

 

Showing top 20/239 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
NELL1SAG0.759618303
NELL1LIPF0.755921303
NELL1ITGB30.753438303
NELL1MGAT4C0.748379303
NELL1TINAGL10.748375303
NELL1MYH70.743079303
NELL1IKZF40.739252303
NELL1KAT70.738012303
NELL1BAGE0.736846303
NELL1LHX30.732971303
NELL1TP53I110.722636303
NELL1SETBP10.719724303
NELL1PTPN90.71896303
NELL1FIBCD10.717021303
NELL1CNKSR20.710264303
NELL1RAB11FIP30.709889303
NELL1TGFB20.704831303
NELL1RAB230.700289303
NELL1SOX170.699769303
NELL1MB0.699229303

For details and further investigation, click here