CCDC36

 

Full name: coiled-coil domain containing 36 Alias Symbol: FLJ25320|CT74
Type: protein-coding gene Cytoband: 3p21.31
Entrez ID: 339834 HGNC ID: HGNC:27945 Ensembl Gene: ENSG00000173421 OMIM ID: 
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of CCDC36:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CCDC36 339834 1564600_a_at -0.1303 0.6325
GSE26886 CCDC36 339834 1564600_a_at 0.0445 0.7168
GSE45670 CCDC36 339834 1564600_a_at 0.0578 0.5577
GSE53622 CCDC36 339834 24389 -0.3753 0.0042
GSE53624 CCDC36 339834 24389 -0.1134 0.2056
GSE63941 CCDC36 339834 1564600_a_at 0.1198 0.3223
GSE77861 CCDC36 339834 1564600_a_at -0.2526 0.0172
GSE97050 CCDC36 339834 A_23_P362770 -0.1920 0.4224
SRP133303 CCDC36 339834 RNAseq -0.1870 0.6154
SRP219564 CCDC36 339834 RNAseq -0.4234 0.5236
TCGA CCDC36 339834 RNAseq -0.3023 0.2976

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by CCDC36 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CCDC36:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CCDC36 339834 0 18 12
GSE20123 CCDC36 339834 0 19 11
GSE43470 CCDC36 339834 0 18 25
GSE46452 CCDC36 339834 2 16 41
GSE47630 CCDC36 339834 1 24 15
GSE54993 CCDC36 339834 6 2 62
GSE54994 CCDC36 339834 0 36 17
GSE60625 CCDC36 339834 5 0 6
GSE74703 CCDC36 339834 0 14 22
GSE74704 CCDC36 339834 0 12 8
TCGA CCDC36 339834 0 78 18

Total number of gains: 14; Total number of losses: 237; Total Number of normals: 237.  


 

Somatic mutations of CCDC36:

 

Generating mutation plots.

 

Highly correlated genes for CCDC36:

 

Showing top 20/164 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CCDC36ZNF280A0.726664404
CCDC36NRG20.724426303
CCDC36ZCWPW10.702741303
CCDC36CSPG50.701569303
CCDC36FCER20.667936303
CCDC36HTR3A0.66421303
CCDC36ABCC80.66221505
CCDC36THRSP0.661321403
CCDC36BPIFB40.659792303
CCDC36ZC4H20.649497403
CCDC36KCNK90.643366403
CCDC36SPATA250.635251303
CCDC36C17orf780.635241303
CCDC36CD2440.635212303
CCDC36GRID20.624063303
CCDC36ADCY10.620168403
CCDC36ACRV10.619968403
CCDC36SIX30.617693403
CCDC36IGSF9B0.612181303
CCDC36CNR20.611345303

For details and further investigation, click here