C4orf36

 

Full name: chromosome 4 open reading frame 36 Alias Symbol: MGC26744
Type: protein-coding gene Cytoband: 4q21.3
Entrez ID: 132989 HGNC ID: HGNC:28386 Ensembl Gene: ENSG00000163633 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of C4orf36:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 C4orf36 132989 1552919_at 0.2099 0.5168
GSE26886 C4orf36 132989 1552919_at 0.0346 0.6487
GSE45670 C4orf36 132989 1552919_at 0.0079 0.9365
GSE63941 C4orf36 132989 1552919_at 1.0283 0.0636
GSE77861 C4orf36 132989 1552919_at -0.0889 0.4707
GSE97050 C4orf36 132989 A_23_P377339 -0.1455 0.6809
SRP064894 C4orf36 132989 RNAseq -0.7681 0.0047
SRP133303 C4orf36 132989 RNAseq -0.1598 0.5184
SRP159526 C4orf36 132989 RNAseq -0.7400 0.1025
SRP219564 C4orf36 132989 RNAseq -0.9330 0.1415
TCGA C4orf36 132989 RNAseq 0.6417 0.0050

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by C4orf36 expression:

 

TCGA

 

Note: Click image to view full size file.  


Copy number change of C4orf36:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 C4orf36 132989 3 12 15
GSE20123 C4orf36 132989 3 12 15
GSE43470 C4orf36 132989 0 13 30
GSE46452 C4orf36 132989 2 35 22
GSE47630 C4orf36 132989 0 20 20
GSE54993 C4orf36 132989 8 0 62
GSE54994 C4orf36 132989 1 10 42
GSE60625 C4orf36 132989 0 0 11
GSE74703 C4orf36 132989 0 11 25
GSE74704 C4orf36 132989 2 7 11
TCGA C4orf36 132989 12 35 49

Total number of gains: 31; Total number of losses: 155; Total Number of normals: 302.  


 

Somatic mutations of C4orf36:

 

Generating mutation plots.

 

Highly correlated genes for C4orf36:

 

Showing top 20/57 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
C4orf36NDUFA100.733708303
C4orf36SNRPG0.686519303
C4orf36RTN4IP10.679016303
C4orf36B4GALNT40.671171303
C4orf36EGLN20.667875303
C4orf36TK20.660832303
C4orf36WNT7A0.653882303
C4orf36FOXRED20.650124303
C4orf36RARA0.649272303
C4orf36XRCC60.647205303
C4orf36RPA30.645572303
C4orf36COASY0.641217303
C4orf36CDH240.633223403
C4orf36MSH20.633071303
C4orf36HSPB90.628375303
C4orf36ZNF5940.623921303
C4orf36SLC25A170.62201303
C4orf36EME10.617839303
C4orf36FDPS0.616883303
C4orf36MRPS110.616829303

For details and further investigation, click here