| Full name: beta-1,4-N-acetyl-galactosaminyltransferase 4 | Alias Symbol: FLJ25045|NGalNAc-T1 | ||
| Type: protein-coding gene | Cytoband: 11p15.5 | ||
| Entrez ID: 338707 | HGNC ID: HGNC:26315 | Ensembl Gene: ENSG00000182272 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of B4GALNT4:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | B4GALNT4 | 338707 | 238080_at | 0.0638 | 0.8789 | |
| GSE26886 | B4GALNT4 | 338707 | 238080_at | 0.3384 | 0.0155 | |
| GSE45670 | B4GALNT4 | 338707 | 238060_s_at | 0.1490 | 0.1053 | |
| GSE53622 | B4GALNT4 | 338707 | 19113 | 0.9613 | 0.0000 | |
| GSE53624 | B4GALNT4 | 338707 | 26520 | 1.8786 | 0.0000 | |
| GSE63941 | B4GALNT4 | 338707 | 238080_at | 0.2756 | 0.3456 | |
| GSE77861 | B4GALNT4 | 338707 | 238060_s_at | -0.1112 | 0.3840 | |
| GSE97050 | B4GALNT4 | 338707 | A_33_P3317603 | 0.1120 | 0.6885 | |
| SRP064894 | B4GALNT4 | 338707 | RNAseq | 1.8287 | 0.0000 | |
| SRP133303 | B4GALNT4 | 338707 | RNAseq | 0.6027 | 0.1466 | |
| SRP159526 | B4GALNT4 | 338707 | RNAseq | 2.7992 | 0.0000 | |
| SRP193095 | B4GALNT4 | 338707 | RNAseq | 1.9233 | 0.0000 | |
| SRP219564 | B4GALNT4 | 338707 | RNAseq | 1.6591 | 0.1035 | |
| TCGA | B4GALNT4 | 338707 | RNAseq | 0.7957 | 0.0064 |
Upregulated datasets: 4; Downregulated datasets: 0.
Survival by B4GALNT4 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of B4GALNT4:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | B4GALNT4 | 338707 | 1 | 11 | 18 | |
| GSE20123 | B4GALNT4 | 338707 | 1 | 12 | 17 | |
| GSE43470 | B4GALNT4 | 338707 | 1 | 10 | 32 | |
| GSE46452 | B4GALNT4 | 338707 | 7 | 8 | 44 | |
| GSE47630 | B4GALNT4 | 338707 | 4 | 12 | 24 | |
| GSE54993 | B4GALNT4 | 338707 | 3 | 2 | 65 | |
| GSE54994 | B4GALNT4 | 338707 | 1 | 12 | 40 | |
| GSE60625 | B4GALNT4 | 338707 | 0 | 0 | 11 | |
| GSE74703 | B4GALNT4 | 338707 | 1 | 8 | 27 | |
| GSE74704 | B4GALNT4 | 338707 | 0 | 8 | 12 | |
| TCGA | B4GALNT4 | 338707 | 8 | 38 | 50 |
Total number of gains: 27; Total number of losses: 121; Total Number of normals: 340.
Somatic mutations of B4GALNT4:
Generating mutation plots.
Highly correlated genes for B4GALNT4:
Showing top 20/172 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| B4GALNT4 | NUDT4 | 0.765801 | 3 | 0 | 3 |
| B4GALNT4 | CISD3 | 0.749431 | 3 | 0 | 3 |
| B4GALNT4 | FLT3LG | 0.735213 | 3 | 0 | 3 |
| B4GALNT4 | TAS2R19 | 0.73451 | 3 | 0 | 3 |
| B4GALNT4 | SMYD3 | 0.710501 | 3 | 0 | 3 |
| B4GALNT4 | ASB7 | 0.710073 | 3 | 0 | 3 |
| B4GALNT4 | AFTPH | 0.708816 | 3 | 0 | 3 |
| B4GALNT4 | NES | 0.703504 | 4 | 0 | 3 |
| B4GALNT4 | USP13 | 0.701881 | 3 | 0 | 3 |
| B4GALNT4 | TMEM92 | 0.694974 | 3 | 0 | 3 |
| B4GALNT4 | SPI1 | 0.690786 | 3 | 0 | 3 |
| B4GALNT4 | FABP4 | 0.686223 | 3 | 0 | 3 |
| B4GALNT4 | BAD | 0.685589 | 3 | 0 | 3 |
| B4GALNT4 | EIF5A | 0.684519 | 3 | 0 | 3 |
| B4GALNT4 | CXCR5 | 0.684113 | 3 | 0 | 3 |
| B4GALNT4 | UCN | 0.677083 | 3 | 0 | 3 |
| B4GALNT4 | TNP2 | 0.676784 | 4 | 0 | 3 |
| B4GALNT4 | TAS2R45 | 0.671552 | 3 | 0 | 3 |
| B4GALNT4 | C4orf36 | 0.671171 | 3 | 0 | 3 |
| B4GALNT4 | STOML1 | 0.670021 | 4 | 0 | 4 |
For details and further investigation, click here
