C6orf136

 

Full name: chromosome 6 open reading frame 136 Alias Symbol: Em:AB023049.8
Type: protein-coding gene Cytoband: 6p21.33
Entrez ID: 221545 HGNC ID: HGNC:21301 Ensembl Gene: ENSG00000204564 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of C6orf136:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 C6orf136 221545 227456_s_at 0.2560 0.7682
GSE26886 C6orf136 221545 227456_s_at 0.3295 0.1544
GSE45670 C6orf136 221545 227456_s_at -0.0258 0.8518
GSE53622 C6orf136 221545 49306 -0.2975 0.0000
GSE53624 C6orf136 221545 49306 0.0743 0.1860
GSE63941 C6orf136 221545 227456_s_at 0.3566 0.4852
GSE77861 C6orf136 221545 227456_s_at -0.2165 0.4101
GSE97050 C6orf136 221545 A_23_P300826 0.0407 0.8882
SRP007169 C6orf136 221545 RNAseq -0.9961 0.0742
SRP008496 C6orf136 221545 RNAseq -0.5860 0.1008
SRP064894 C6orf136 221545 RNAseq 0.2043 0.4243
SRP133303 C6orf136 221545 RNAseq -0.4190 0.0016
SRP159526 C6orf136 221545 RNAseq 0.0150 0.9421
SRP193095 C6orf136 221545 RNAseq -0.3134 0.0134
SRP219564 C6orf136 221545 RNAseq 0.3000 0.4912
TCGA C6orf136 221545 RNAseq -0.0593 0.3648

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by C6orf136 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of C6orf136:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 C6orf136 221545 5 1 24
GSE20123 C6orf136 221545 5 1 24
GSE43470 C6orf136 221545 5 1 37
GSE46452 C6orf136 221545 1 10 48
GSE47630 C6orf136 221545 7 3 30
GSE54993 C6orf136 221545 2 1 67
GSE54994 C6orf136 221545 11 4 38
GSE60625 C6orf136 221545 0 1 10
GSE74703 C6orf136 221545 5 0 31
GSE74704 C6orf136 221545 2 0 18
TCGA C6orf136 221545 18 16 62

Total number of gains: 61; Total number of losses: 38; Total Number of normals: 389.  


 

Somatic mutations of C6orf136:

 

Generating mutation plots.

 

Highly correlated genes for C6orf136:

 

Showing top 20/244 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
C6orf136ABHD16A0.87264303
C6orf136ZNF5020.835584303
C6orf136ZSCAN120.816236303
C6orf136ZNF5060.787228303
C6orf136MEA10.786134404
C6orf136KCTD150.781688303
C6orf136NUP1530.780401303
C6orf136PROSER10.780178303
C6orf136GPR1430.761006303
C6orf136ZFAND30.758996303
C6orf136SYNGR30.756949303
C6orf136CAMTA10.755606303
C6orf136UROS0.750018303
C6orf136SLC25A190.741227303
C6orf136PIK3R30.738943303
C6orf136ANKRD170.730247303
C6orf136CNNM30.721195303
C6orf136PLXNB10.718389403
C6orf136SMARCC10.71765404
C6orf136EI240.717209303

For details and further investigation, click here